Detail



ID : Ahg477103

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477103|fgenesh2_kg.2__2233__AT1G79380.1
Sequence
ATATATAGTT TCATTTTTTT CTGGGTTTCG GTACTCATGT GGGTTCAGTA AATAAAAATG TTTATAAGTC CCCATCTGGC CGCGTCAAAA ATACTAGATA ACAATTAGTG GTTGGCATAG AAAAGTAATG ATTGTTGCCG CGTAGAATGA AAATAATAAA TTAATTAAGA ACAGTGAAGC AATAAATGTT TTAGTCTTCT TAAATATTTC AGCAAAAAAA AAAAAGATTC TATCCATTAT CAAGGAAAAA AAAATCTGAA TTCGAATTCG AGGAAGAAGA AAGGAGATGA CTATGGGGAA TTTCTTAAAG AGATTTGGAA GTGGAAAAAG CAGAAGCAGA AGCAGTAGAA GTATGACTCT GGGAACAACG TCGTCTCAAT CTCATGAACC ATCTCCGTCG GCGGATCCTC CAGTCTCCCT TGCCGATAAT ATCAACGCCG CCAAGAAGAA GTACGCTCTC ATCCCTGACC GCTTCTCCTC CCTCGACCAG GTATCAAAAG CTCTAAGAGA AGCTGGTCTT GAATCATCCA ATCTCATTCT CGGAGTTGAT TTCACAAAGA GCAACGAGTG GACTGGGAAA ACTTCTTTCG ATGGAAAATG TCTGCACGCC CTCGGCGAAA CTCCGAATCC ATATGAAAAG GCGATTTTTG TAATCGGCCA AACGTTGGCT CCTTTCGACG AAGATAATCT CATCCCTTGT TTCGGCTTTG GCGATTCAAC AACTCACGAC GAGGAAGTGT TCGGTTTCCA TAGCGACAAT TCTCCATGTC ATGGCTTCGA AGAGGTCTTA GCATGTTACA GGAGAATTGC ACCCAACTTG CGTCTATCAG GGCCAACGTC GTATGGACCG CTCATCGATG CTGCGATTGA CATTGTCGAG AAGAACAACG GACAATTCCA TGTTCTGGTG ATCGTCGCAG ATGGACAGGT AACGAGAGGT ACGGATATGG CCGAGGGAGA ACTCAGTCAA CAAGAGAAAT CAACCATCGA CGCCATTGTA AATGCAAGCT CGTATGCTTT GTCGATTGTT TTAGTCGGTG TTGGAGACGG GCCATGGGAA GACATGAGGA AGTTTGATGA CAAGATCCCT AAGCGTGAAT TCGACAACTT TCAGTTTGTG AATTTCACAG AGATTATGAC CAGAAACTCA CCAGAGTCTG CCAAAGAAAC TGCCTTTGCT CTTGCTGCTC TAATGGAGAT TCCCTTTCAG TATCAAGCAG CCATCGAACT CCGCTTACTC GGGAAACAGA CGGGCACAGC TAAGACAATA GTTCCGAGGC CACCACCAAC TCCATACACG CCTCCAACTA ATGCTGAACT ACCATCAACT GCATCACCTG AACAAACCCA GAGTTGCCCG ATTTGTCTGA CTAACCGAAA AGACGTGGCT TTCAGCTGTG GCCACATGAC TTGTGGAGAT TGCGGATCCA AAATATCAAA TTGCCCGATC TGCCGAGTAC GGATCACGAG CCGCCTAAGG CTTTACACGT GATCAATGCC CACAAAACTT TTTCCTGACC ACGGCTTTAC ACGTGATCAA TGCCGACATG CCGAGAAACT TTATTTCTGC ACATAACAAA AGGCTTGCAT ATACTATCCT TCTCCTTTGT AGAATCTACA GTTTGGTTTG CCAAGTGTTT CTGAGAATGT TCCACAATCA GCATGTACCA TGTAATTCCG TATCTACTAT AAAACAGTAA CTTTGCAAAC AAGAATGAAG AAGCAATG 
Length1728
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17578955.. 17581375
Download Sequence
A.thaliana
AGI-codeAT1G79380.1
DescriptionCa(2)-dependent phospholipid-binding protein (Copine) family
TAIR curator summary
Alias[RGLG4][RING DOMAIN LIGASE 4]
Gene coexpression
MR
MR Locus Description
4.3589 Ahg477519 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase
6 Ahg946668 importin alpha isoform 2
6.63325 Ahg472301 high mobility group B2
16.0624 Ahg478469 Duplicated homeodomain-like superfamily protein
17.8885 Ahg470417 cryptochrome 2
18.8944 Ahg487670 alpha-galactosidase 2
26.1534 Ahg938727 Insulinase (Peptidase family M16) family protein
32.3574 Ahg902749 cytochrome P450, family 709, subfamily B, polypeptide 2
40.5832 Ahg318458 calmodulin binding;transcription regulators
42.4264 Ahg484471
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression