Detail



ID : Ahg946934

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|946934|scaffold_703163.1
Sequence
TGAATCCTTA ACCTGAGCAC CATGTGTACG TTAGAGAAGC GTGGCGATCT CTTTCACCTA ACCCTAACCG GTGACGACGA GCACAGATTC CACCCGGACA CGATCGCCTC CGTTCTCTCG CTTCTTGAAC AAGCTAAATC TCAATCTACA AAAGGATCCG TCCTCATCAC TACCGGTCAC GGAAAGTTCT TCTCCAATGG CTTTGATCTC GCATGGGCCC AATCCGCTGG ACACGGGGCT ATAGAACGGA TGCACCAAAT GGTCAAATCC TTCAAACCCG TGTTAGCGGC CCTCCTCGAT CTTCCAATGC CGACGATCGC CGCCTTGAAC GGCCACGCAG CCGCCTCGGG GCTGATGTTT GCGCTGAGCC ATGACTACGT TTTCATGAGG AAAGACCGTG GGGTTCTATA CATGAGCGAG GTGGACATCG GGCTGCCGGT GCCAGACTAC TTCTCGGCGT TGGTTGTAGC TAAGGTCGGG TCAGGTATCG CGAGAAGGGA GCTGTTGCTG AGCGGGAAGA AGCTCAAAGG AGAAGACGCG GTGGCTCTCG GGATCGTGGA CTCCGCGGCG CACGATAGCG CTGAAGGTGT TGTGGAGGCT ACAGTGAGCC TTGGGGAAAG TTTGGCTGCT AAGAAATGGA ATGGAGAGGT GTATGCATCC ATTAGGAGAA GTTTGTATCC GGAGCTTTGT CGGATGCTGG AGTTAACGGC CAATAACTTG GCAACTCACA ATCTCTAGAA ACTCTCATTG TCTTGTTT 
Length758
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT4G14440.1
Description3-hydroxyacyl-CoA dehydratase 1
TAIR curator summaryencodes a cytosolic delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation
Alias[ATECI3][ECI3][HCD1][ARABIDOPSIS THALIANA DELTA(3), DELTA(2)-ENOYL COA ISOMERASE 3][DELTA(3), DELTA(2)-ENOYL COA ISOMERASE 3][3-hydroxyacyl-CoA dehydratase 1]
Gene coexpression
MR
MR Locus Description
6.78233 Ahg921841 glycosylphosphatidylinositol-anchored lipid protein transfer 1
13.0384 Ahg918798 glycerol-3-phosphate acyltransferase 4
16.4317 Ahg485512 lipid transfer protein 5
21.6333 Ahg474081 long-chain acyl-CoA synthetase 2
28.4077 Ahg943905 cinnamyl alcohol dehydrogenase 9
29.6985 Ahg918799 cytochrome P450, family 86, subfamily A, polypeptide 4
30.7896 Ahg479089 GDSL-like Lipase/Acylhydrolase superfamily protein
36.4829 Ahg471997 white-brown complex homolog protein 11
45.3872 Ahg905917 Subtilase family protein
46.3681 Ahg487977 Protein of unknown function, DUF642
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression