Detail



ID : Ahg950012

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950012|scaffold_801899.1
Sequence
ACCATCGAGA GTACGTTACA ATGGGGAAAT CTTCATCGTC CTCAAAGATA ATCAAACATT CCAAAGATTC GTCTAATAAG TGGCGATCGG TGAAGAAGAA GAAGAAGAGT AAGAGAAACA AATCAAAGAA GATTCGTCGG ATTAAAGAGA GTGAATCTAG TGGTTCTGAT TCTTCTTTGT ATTCTAGTTC AGAAGATGAT TACAGGAGAA AGAAGAAGCG TAGATCTAAA TTGAGCAAGA AGAGGTCACG GAAGAGGTAC TCTAGTAGTG AGAGTGATGA TGACGATGAT GATGATGATT CTCGTCTTTT AAAGAAAAAG AAAAGATCGA AGAGGAAAGA CGAATATGTA GGGAAGAAGA AGAAGAAAGT TGTTTTAAGA AAGAAACGTA AGAGAGATTT GAGTTCTAGC TCGACTAGTA GTGAGCAGAG CGATAATGAC GGTAGTGAGA GTGATGGGAA GAGATGGTCT AGGGATAGAG GAAGAAGACT TGGTGAGGTT GATGATGCGC GGAGTAGAAG TAGAGATGGG TTGGAAGGAG AGAGTGAAGA ACCTGATGAA TGCTGGCAAG TGGAAGGTGA AGTTATACCT GAGAAGAATC CTAGAAGGCT TAAATCGATT GTTGTTGTAT CATATAGTTA TGGCCATGAT GAGAGCAAGG AAGAAGATGA CCGAGATGTC TATATGACAT GCGGTGGTAA TAGAGAGTTG GGACATAGTG AGGAATCTGA TGAGAGAGAT GGTGAAACTA CCGTCTCCTA TTCTAGAACT CGTGCTGATG ACAACGGACT TAAAACTGTT GGTTATGATG AGTTTGGTGA AAGTAATAGC ATGAAAGATG ATAACCTGGA AGCCATTCTA AAGAAAAGAG CACTGGAGAA TCTAAAAAGA TTTCGTGGAG TGGCCCAAAA GAGTGGAATA GCTAAAAAAG AGGTGTCTTC TGTTTCAGAA GGAGAACCTC TGCAAATTGA ATCTGAAAAA GTTGAGGAGT CACAAGACCA TGGTCTCATG GAGCAGAAGG TTTGTGATTC TGAGGTAAGC AAAGATCTCG AGACTTCAGA AAAGATTTTA CATGTTGTTA ATGTTAAGGA ATCTGGAACA GCATTGGCTA ATTCTGCCTC TCAAAAAGAT CAGCAGTCTG GTGATACTGC CAAGGTTAAA GCTAGTACTG GTATTAGCTC TTGTTCAACG AAACGAAAGT TGGTTAGACC GGTATTGGGG AAAGATAGTT TAAATCTAGC TAGCAGGAAA GAAGTTAGTG GTAGCCAAGA TGCTGAAGCT GAGAGCATCG GTGGCAGTAC CATTGACAAG AATTGTTTAG AAAGTACTCT AGCTTTGGTA ACAAAGAATG AAGGTGAACA CATAGAACCA ACAAAAATTC GTTCTACTCT CAACGCAGAG TCTTCTTCTC ATGCTGACAC TGAGGCGGTA GATGAAATCA AAGGAAGGTC TCAGTCTGAA CAGAAAATGG ATGAAACAAA AGATGAGTCA CAGTACGAAC AAAAAACGAT GACTGTGATG AGGGGTGGAG AAATGGTTCA GGTGAGTTAC AAGGTCTACA TTCCTAAGAA GACCTCTTCT TTGGGTAGAA GAAAACTCAA CAGGTGAAGC GGCGACATGA AGATAGT 
Length1627
Protein Sequence
Protein Residue
Map Locationscaffold_8: 15167634.. 15169522
Download Sequence
A.thaliana
AGI-codeAT5G53930.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
20.6398 Ahg327088 global transcription factor group A2
21.2132 Ahg947584 homolog of Xeroderma pigmentosum complementation group B 2
25.5343 Ahg355725 RNA-binding (RRM/RBD/RNP motifs) family protein
28.0535 Ahg487613 Plant calmodulin-binding protein-related
44.5421 Ahg910238 callose synthase 1
60.1747 Ahg480844 Afadin/alpha-actinin-binding protein
66.453 Ahg486937 DNAJ heat shock family protein
69.0652 Ahg344464 Structural maintenance of chromosomes (SMC) family protein
70.3562 Ahg347854 alpha/beta-Hydrolases superfamily protein
87.55 Ahg494122 tryptophan synthase beta type 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression