Detail



ID : Ahg950512

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950512|scaffold_802399.1
Sequence
AGAAGAAGAA GAAGAAGACG ATGAGCAGAT TCGGGGCTGG GAACAGATCC GTTTCCAAGC TCGTATTCAC CATTTGTGTT GCTATCCTGT TCATACCATC TCTATCATAT GGAGCTTCAC ATGGAAACCG TAAGACGGCG AAGTCTTCTG TATTTTCCTT GTTCAATCTT AGGGACAAAA GCAGATTTTG GAGCGAGTCT GTCTTTCGTA CCGATTTTGA TGATTTGGAG TCTTCGGTTC ACTCGAATTC TGGTGTGCTG AATTACACTA AGTCAGGAAA TATTGCGAGT TACTTAGAGC TTATGGAAGT CGATTCTGTC TATCTTCCCG TGCCAGTTAA TTTTATTTTC ATAGGGTTTG AAGGAAAAGG AAACCAAGAC TTCAAACTCC GTCCCGAGGA ACTTGAGCGT TGGTTTAATA AACTTGATCA CATGTTTGAA CATACACGAG TTCCACAAAT CAAAGAAGTT CTCAATCCCT TTTACAAGAT TAACATTGAA AAGGAGGTGA AGCACCATCT TCCTATCATC AGTCGCGTGA ACTACAACTT TTCTGTTCAT GCTATACAAA TGGGAGAAAA GGTGACATCA GTAATTGAAC GCGCAATCAA AGTTTTAGCT CGCAAAGATG ATGTGTCTAC CAATAAAGAT GAGGAAAGTG CTCTATTGCA AGTGGATGTT GAGATGATGG AATTCATTTT CACTAGCCTT GTCGAATATT TCCATCTCGA GGATGCATAC AACGTATTTG TTTTGAATCC CAAACACGAT AACAAAAAAG CCAGATATGG ATACCGGAGA GGGTTTTCAG AGTCAGAGTT ATCTTATCTG AAAGAGAACA AGGAAATACT TAAAAAACTT CTTCAGTCTG GAAAACCGTC AGAAAATATT TTAGCATTTG ATATGGTGAG GAAGCCATTG TACGACAGAC ATCCAATGCT GAAATTTTCC TGGACAAATG CAGAGGAGAC TGATACGGCT GAGTGGTTTA ATGCATGCCA GGATGCTCTT AACAAGTTGG AACAGCTATC TCTTGGTAAA GATGCAGCCG AACTCATTCA GAGTAAGGTT TTGCAGTTGC TTAGAGGGAA AAATGAAGAT ATGAAGGTGT TTCTAGAGAA GGATTTAAAA GCTGGAGACT TTGGCAATCT TAACGCAGAA TGTCTGACTG ATATCTGGAT CGGAAAGGGC AGGTGGGCAT TTATCGACTT AACTGCTGGC CCTTTTTCAT GGGGACCTTC TGTCGGTGGG GAAGGAGTGC GAACCGAACT TAGTTTGCCA AATGTGGGAA AGACTATTGG TGCAGTTGCA GAAATATCTG AAGATGAAGC AGAAGACAAA CTGCAAGCTG CAATTCAGGA TAAATTTTCT GTATTTGGAG AGAATGACCA TCAGGCTGTT GACATTCTTC TAGCGGAGAT TGATGTATAT GAACTATTTG CTTTCAAGCA CTGCAAGGGA AGGAAAGTGA AGCTTGCTCT TTGTGAAGAA CTTGATGAAA GAATGCGGGA TCTAAAAACC GAGCTCCAGT CATTTGACGG AGAGGAATAT GATGAGACTC ACAAGAGAAA AGCCATGGAT GCACTAAGAC GAATGGAGAG CTGGAATTTG TTTAGTGATG AACATGAGGA GTTCCAAAAT TACACAGTTG CACGCGATAC TTTCCTTGCA CATTTAGGTG CTACTCTCTG GGGATCCATG AGACATATAG TATCCCCCTC AGTTGCTGAT GGTGCATTTC ATCATTATGA GAAGATCTCT TTTCAGCTTA TCTTCATCAC CCAAGAGAAA GTTCGACAAA TCAAACAGCT GCCGGTGGAT CTCAAGGCCC TCATGGATGG GCTTTCTTCG CTGTTGTTGC CTTCTCAGAA GCCTATGTTC AGCCAGCATA TGTTAACACT CTCTGAGGAT CCTGCATTGG CTATGGCTTT TTCAGTAGCC CGAAGGGCAG CAGCTGTCCC TCTATTGCTT GTCAATGGAA CTTACCGGAA GACTGTTCGT TCATATCTTG ATTCATCAAT CCTCCAGTAC CAATTACAGA GGGTGAACGA TCACACTTCC CTTAAAGGAG GTCATGCCCA CAGCAGGTCC ACTCTTGAAA TTCCTATCTT TTGGCTCATC AGTGGTGATC CACTGCTGAT TGACAAGCAT TATCAAGCAA AGGCGCTTTC AAACATGGTT GTTGTTGTTC AGTCGGAGGC ATCTTCATGG GAGAGCCATT TGCAATGCAA CGGGCGATCA CTGTTATGGG ATCTAAGGAG CCCCGTGAAA GCAGCCATGG CTTCTGTTGC TGAACATCTA GCCGGATTGC TTCCTCTTCA TCTCGTCTAC AGTGTAGCGC ATGAAAGTGC AATTGAGGAC TGGACATGGT CAGTAGGTTG CAATCCCTTT TCCGTCACTT CTCAAGGTTG GCTCCTTTCA CAGTTTCAAT CTGACACAAT TGCCCGGAGT TATATGATTA CGGCGCTTGA AGAATCAATA CAAGCAGTCA ATTCAGGGAT CCATCTTCTG CGGCTGGAGA GAACGAATAA AAAAACGTTT AAGCTCTTCC AATCAAGGGA ACGTGAGCTG ATGAACAAGT ACAAGTACGT GGTTAGCCTG TGGAGACGAC TTTCGAATGT TGCGGGAGAA ACACGATATG GGGATGCCAT GAGATTTCTG CATACCTTAG AAGAAGCTAC TAGCTCATTC GTAAGGGAAG TGAATGCAAC AGTGGGGGTT TTGCATCCAA TTCACTGCAC AAAAGAGAGG AAGGTGAAAG TAGAAGTGGA CATGACCACA ATTCCTGCCT TTATCATAGT TTTGATTCTT CTTTACGCTG TCTTAAGGCC AAGAGCTCCT AAGCCAAAGA TTAACTGATG TCTAAAATCT AACACAAA 
Length2878
Protein Sequence
Protein Residue
Map Locationscaffold_8: 17310931.. 17318017
Download Sequence
A.thaliana
AGI-codeAT5G58100.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.89898 Ahg489218 XS domain-containing protein / XS zinc finger domain-containing protein-related
5.38516 Ahg320206 cyclic nucleotide-gated channel 6
16.5831 Ahg495124 SUMO-activating enzyme 1B
17.088 Ahg477721 RNA-binding KH domain-containing protein
21.3542 Ahg480309 ARM repeat superfamily protein
22.3159 Ahg358320 leo1-like family protein
39.6611 Ahg323893 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain
43.9318 Ahg488264 bromodomain and extraterminal domain protein 9
44.1928 Ahg471081 ATP phosphoribosyl transferase 2
44.2154 Ahg482372 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression