Detail



ID : Ahg470689

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470689|fgenesh2_kg.1__643__AT1G06680.1
Sequence
ACTCTTGGTT TCATCTCCAT ACATTAACAC ACTCCAACAA TCCTCAAAAA ACACTTTCAT AGCTTAATCA CACACAAAAA GAAGAGAGAA AGAGAGATAT ACAGAGAGAG ATAATGGCGT ACAGTGCGTG TTTCCTACAC CAGAGCGCAT TGGCTTCCTC AGCCGCACGA TCATCATCTT CCTCCTCATC CCAGCGTCAC GTGTCACTCT CCAAACCTGT TCAGATTATG TGTAAAGCTC AACAGTCTCA TGAAGACGAT AACTCCGCCG TCTCCCGCCG TCTTGCTCTC ACTCTCCTCG TCGGCGCCGC TGCTGTTGGT TCCAAAGTAT CTCCTGCTGA TGCCGCCTAC GGTGAAGCTG CAAATGTGTT TGGGAAGCCA AAGACGAACA CAGACTTCTT GCCATACAAC GGAGATGGAT TCAAAGTGCA GGTGCCAGCA AAATGGAACC CAAGCAAAGA GATTGAGTAT CCAGGACAAG TCCTTAGGTA CGAAGACAAC TTCGATGCTA CTAGCAATCT CAATGTCATG GTCACTCCTA CCGACAAGAA GTCCATCACT GATTACGGTT CTCCCGAAGA GTTCCTCTCT CAGGTTAATT ACCTCCTAGG GAAACAAGCT TACTTCGGTG AGACTGCCTC TGAGGGAGGC TTTGACAACA ATGCAGTGGC AACAGCAAAC ATTCTGGAGT CATCATCTCA GGAAGTTGGT GGGAAACCCT ACTATTACCT GTCTGTGTTG ACAAGAACGG CTGATGGAGA CGAAGGTGGG AAGCATCAGC TGATCACAGC CACTGTGAAT GGAGGGAAGC TTTACATCTG CAAAGCACAA GCTGGAGACA AGAGGTGGTT CAAGGGAGCT AGGAAATTTG TCGAGAGTGC AGCCACTTCT TTCAGTGTTG CTTGAGTGAA AGCAACACAA CATAACAATG CTCTGCTTGC TTTCTTCATT TGTCTCTTGT AAAAAATGGA AATGAAACTG AGCTTTTGAG AACTATCAAG ATGATGTCAC CTTTGCGGTT TCACTTGTGT ACCTGTGATA ACAGACTCGT TTTAAAAAAA AACTATATTC AATAGATCTT TT 
Length1082
Protein Sequence
Protein Residue
Map Locationscaffold_1: 2271440.. 2272968
Download Sequence
A.thaliana
AGI-codeAT1G06680.1
Descriptionphotosystem II subunit P-1
TAIR curator summaryEncodes a 23 kD extrinsic protein that is part of photosystem II and participates in the regulation of oxygen evolution.
Alias[OE23][OEE2][PSBP-1][PSII-P][OXYGEN EVOLVING COMPLEX SUBUNIT 23 KDA][OXYGEN-EVOLVING ENHANCER PROTEIN 2][photosystem II subunit P-1][PHOTOSYSTEM II SUBUNIT P]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg951584 PS II oxygen-evolving complex 1
1.73205 Ahg490167 photosystem II subunit Q-2
2.23607 Ahg491882 Photosystem I reaction centre subunit IV / PsaE protein
2.44949 Ahg915184 photosystem I subunit l
3 Ahg492755 photosystem II subunit QA
3.4641 Ahg475174 photosystem I light harvesting complex gene 3
3.4641 Ahg474626 photosystem I subunit G
4.24264 Ahg489877 light harvesting complex of photosystem II 5
4.47214 Ahg474340 photosystem I subunit H2
4.69042 Ahg479067 RHO guanyl-nucleotide exchange factor 13
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression