Detail



ID : Ahg486922

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486922|fgenesh2_kg.6__56__AT5G01530.1
Sequence
TGGATTTGTG TATCAATCCA ACGGTCGTAA TCGTCTTTCC AAGATAGCTC AGCTCCAAAT GAAAAAAAAA TCCCCTCCAC GCATCTATAA TCGTGGATCA AGAAACTGTG CATTCTTCTC TATCTTGCCG GAGATGGCCG CCACTTCCGC CGCTGCTGCA GCTGCTTCTT CCATCATGGG TACTCGGGTT GCTCCCGGTA TCCATCCCGG TTCAAGTCGG TTCACGGCCC TGTTCAGTTT GGGAAAGAAG AAGGCAGCTC CCAAAAAGAG TGCGTCCAAA AAGACGGTGA CTACGGACCG GCCTCTTTGG TACCCAGGCG CCATTTCTCC TGAATGGCTC GATGGTTCGT TGGTTGGAGA TTACGGTTTT GATCCCTTTG GTTTGGGTAA ACCGGCCGAG TATCTCCAGT TCGATATCGA TTCACTAGAC CAGAATCTGG CTAAGAACTT GGCCGGAGAC GTGATCGGAA CCCGTACGGA AGCTGCCGAC GCCAAATCGA CGCCGTTTCA GCCGTACAGT GAGGTGTTCG GAATCCAGAG ATTCAGGGAA TGCGAGCTGA TCCACGGACG GTGGGCGATG CTCGCTACTC TCGGCGCTCT CTCCGTCGAG TGGCTCACCG GCGTTACTTG GCAAGACGCC GGCAAGGTGG AGCTTGTAGA TGGATCGTCC TACTTGGGGC AGCCATTACC GTTCTCGATC TCGACATTGA TATGGATCGA GGTGTTAGTG GTCGGCTACA TCGAGTTCCA GCGCAATGCT GAGCTTGACT CGGAGAAGCG TTTGTACCCG GGAGGCAAGT ACTTCGACCC GCTAGGTTTG GCGGCTGACC CGGAGAAGAA GGCTCAACTT CAATTAGCCG AGATCAAGCA CGCACGTCTT GCGATGGTCG CCTTCTTGGG ATTTGCGGTT CAAGCGGCTG CAACGGGTAA AGGTCCACTC AACAATTGGG CTACTCACCT CAGTGATCCA CTCCACACCA CCATCATCGA TACCTTCTCC TCCTCTTAAG ATTCTATGTG TAACTTTTGT ATAAACAGAG CTATGATACT GAATCGAGTT TGGGCTTTTG CTCGTTTGGT TTATCTACTT GTTT 
Length1094
Protein Sequence
Protein Residue
Map Locationscaffold_6: 199241.. 200696
Download Sequence
A.thaliana
AGI-codeAT5G01530.1
Descriptionlight harvesting complex photosystem II
TAIR curator summary
Alias[LHCB4.1][light harvesting complex photosystem II]
Gene coexpression
MR
MR Locus Description
1 Ahg489877 light harvesting complex of photosystem II 5
1.41421 Ahg485905 photosystem I light harvesting complex gene 1
2.23607 Ahg486624 photosystem I light harvesting complex gene 2
3.74166 Ahg471781 light harvesting complex photosystem II subunit 6
3.87298 Ahg951584 PS II oxygen-evolving complex 1
4.47214 Ahg915184 photosystem I subunit l
4.89898 Ahg922093 photosystem I subunit K
5.47723 Ahg475174 photosystem I light harvesting complex gene 3
6.9282 Ahg470899 photosystem I subunit O
7.07107 Ahg480223 photosystem II subunit X
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression