Detail



ID : Ahg315417

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|315417|fgenesh1_pm.C_scaffold_2000450
Sequence
ATGAGTATTA TCACGAATCC ATCTAGTTTC ACACTTGTTT TAATTTCCAT TACGCTGGTC CTAGCTCTTG CTAGACGATT TTCAAGATCC ATGAAACCAA AAGGTCAACT TCCTCCCGGC CCACGGGGAT GGCCAATCAT TGGAAACATC CTCCAAATGA TCATGAACCG ACCGGCTCAC TTGTGGATCC ACCGTGTCAT GGAAGAACTG CAAACGGAGA TAGCTTGCTT CCGCTTTGCC AGTTTCCACG TCATCACCGT AACCTCAAGC GAGATTGCCC GTGAAGTGCT TAGGGAAAAA GACGAGGTTC TTGCAGACAG GTCAGAGTCT TACGCCAGCT ATCTCATAAG CAATGGCTAT AAGGGCATTA CTTTCACTTC CTACGGAGAG AACTGGAAGC TGATGAAGAA ATTGATGACC ACCAAGCTTA TGTCCCCGAC AACATTGAGC AAAACCCTCG GTTACAGAAA CATAGAAGCG GATAATATTG TCACATATGT CTACAATCTA TGCCGACTAG TGACGAAGCC GATTAACGTG AGGGATACGA TCTTAACTTA TTCCCACGCC GTGATGATGA GGATGATGTT TGGCCAGAGG CATTTTGATG AAGCTGTAGA GATCGGCGGT CTCGGGCCAA AAGAGAAAGA GCATATGGAC GCAATATACC TAGCTCTTGA TTGCTTTTTC AGCTTCAACT TAGCAAATTA CATCCCTTTT CTTAGTGGGT GGAACGTAGA TAAAGAGGAG AAGGAGGTAA GAGAAGCGGT TCATATAATC AACAGATGTA ACGACCCGAT CATCCAAGCC AGAATACGTT TATGGAGGAA GAAAGGCGGA AAAGCTACGG AAGAAGACTG GCTCGATATC CTCATCACGT TAAAAGATGA TCAAGGAATG CATTTGTACA CATTTGATCA GATTAGGGCT CAATGCAAGG AAATCAATTT AGCAACAATT GACAATATGA TGAATAACGT GGAGTGGACG ATAGCGGAGA TGTTGAATCA CCCAGAGATT CTTGAGAAAG CCACAAATGA ATTGGACATG ATAGTTGGGA AAGACAGACT TGTGCAAGAA TCAGACATAC CAAAACTCAA CTACATCAAA GCTTGTAGCA AAGAATCTTT TCGTCTTCAC CCTGCTAATG TGTTCATGCC CCATCATGTA GCCCGAGAAG ATACTACCCT CGCGGGTTAC TTTGTTCCCA AAGGTAGTCA AATTCTTGTG AGCCGTGTGG GGCTTGGTCG GAATCCTAAA ATATGGGACG AGCCTAACAC GTTCAAGCCC GAAAGACACC TCGATGGCCA TGTCGAGAAC TCATTGGGCG TGACTCTGAT GGAACCGGAG ATGCTGTTCG TTACATTCGG TACCGGTCGG CGTAGCTGCC CAGGCACTAA GATTGGGACA TCTATGACCA TCATGTTGTT AGCCAGGCTT CTCCAAGGGT TCGAATGGAC TCTCCCTAAT GGTAAAACTC AAGTCGAACT CATTTCGGCG GAGAGCAACT TGTTTATGGC CAAGCCTCTA CTCGCATGCG CGAAACCTAG GTTGGCTCCA AGTTTATATC CGAAAATCCA GTTCTAA 
Length1587
Protein Sequence
Protein Residue
Map Locationscaffold_2: 4214566.. 4227192
Download Sequence
A.thaliana
AGI-codeAT1G58260.1
Descriptioncytochrome p450 79c2
TAIR curator summarymember of CYP79C subfamily of cytochrome p450s. Encodes a putative xylan endohydrolase. similar to some closely linked pseudogenes.
Alias[CYP79C2][CYP79C3P][cytochrome p450 79c2]
Gene coexpression
MR
MR Locus Description
19.8746 Ahg479712 Domain of unknown function (DUF26)
27.2213 Ahg351860
49.7896 Ahg924778
50.2792 Ahg936571
52.5071 Ahg344858 Phosphatidylinositol 3- and 4-kinase family protein
57.2713 Ahg931870 vernalization5/VIN3-like
67.5648 Ahg921343 SIN3-like 3
69.9142 Ahg952360
78.3326 Ahg904968
79.467 Ahg487944 Exostosin family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression