Detail



ID : Ahg315594

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|315594|fgenesh1_pm.C_scaffold_2000627
Sequence
ATGGAGATTC TGATTTCTCT TTCCATTCTT GCTCTCCTCT TTTCCGGAGA AGTAGCTGAT TCAAAGAACA TCGTTTTCGA AGAGGTTAGA GTTGGATTGG TGGTGGACTT GGGTTCTATT CAAGGAAAGA TTCTCCAAAC TTCTATTTCC TTAGCGCTCT CAGATTTCTA TCGCGTAAAC AATAGTTATC GAACCAGAGT CTCTGTTTTG GATAGAGACT CCCAAGGAGA CCCTTTGCTT GCTCTCGCTG CCGTGAAAGC CATTGTTGGT GCAGAATCAT TACAGGTAGC AAAACTATTA GCCGCGATTA GCAAGAAAGC TAAAGTTCCG GTGATATTCT ACAAGAAAAT ATGTCTACAG CCACCACCTA GCTACGACAA ATATGTAGCT ATTATGTCTA CTTTGGTGCC AAACACTTTG TCTTTGAACA AATATAATCA CTTTCTTCAT TGGACGTACG ATATTACATC AGAGGCTAAG GGGATTACGA GTCTCATACA AGAATTGAAT TTGAAGTCGG TTGTGAGAAG TTTTGCAAAT ATTGGTGGAT CATTTCCAAG ATGGTGGAGT CCAAATCCAC CGTACTACTT CTTTCTCAGA ATCATCACTA GACGAAGATT ACATGGTCTA TCACTACGGA AGCTCAAGTC CGCGAGAGCA GCCGTTTTCA TTGTACATAT GTCGGAGATT CTTGTTTCTC GTCTCTTCCA ATGTGCGGAT AAATTAGGAA TGATGAAAGA AGGATATGTT TGGATACTCA CCGCAAGAAC CATGAATCAT TTTCATAACT TAGATGGTTT TGCAGTTAGG TCAATGCAAG GGGTCATTGG TTTCAGATCA TACATTCCAG TATCAGAACA TGTAACGAAT TTTACTTCAA GATTGCGAAA ATTAATGGTT GATGATGACA CCGCACAGAT AGAAACTGAG CATTTTAGTG TTGTGATCAG TGTATGGGCA CATGATATTG CTTGTATTCT AGCAACTGCA GTAGAGAATA TCTGGCTAAG AGCCTCTAAT GAATCAAATC TTCTTGAGAC GATTAAACAG AGTGGATTTA AGGGTTTGAG TCATGGTGAC ATGCAAATCG TTGGCAACAA ATATCTCTTA GGAACATTTG AGATTGTGAA TATGGTAGGA ACAGGGGTTA GGAGAATAGG ATTATGGAGT TGTATTAATT TCTGTGGAAG AAGACACGTC ATGGTTTCTT CTATCAATGA ACTTGAAACC ATTAGCTGGC CTGGCGGGTC TGGTAGAATC CCAAGACATC GGTTTTTGGA AGAGAACGGT GAAAGGAAGT TGCTCAGGGT CTTGGTTACC TCAAGAAATC GCTTCCCACA TCTGGTGGCG GTGCGTCCTG ATCCTGAAAC AGGTCTTAAT ATTGTCAGTG GATTCTGCAT AGAGGTTTTC AAGGCTTCCA TTGCTCCTTT CAACTACGAG CTAGAATTTA TACCTTATGA TAGATCTTCT AACTATGATG ATCTTGCTAA TGAATTATTT ACTCAGAGAG ACAAATATGA TGCAGCTGTT GGTGACATCA CCATCACTTA CAACAGATCT TTGTATGTTG ATTTTACCTT GCCTTACACT GAGATGGGTG TTGGAGTCCT GACGGTAAAG AAAAAGAAAG AGAGCATGTG GACGTTCTTT GACCCTCTTG ACAAATCCTT GTGGCTAGCA ACTGGAGCTT TCTTCATCTT GACTGGCTTC GTTGTTTGGT TGGTTGAACG AGCGGTTAAT CCGGAGTTCC AGGGCTCCTG GGGACAGCAA CTTGGTATGA TGCTTTGGTT TGGGTTTTCC ACCATTGTGT TTGCTCACAG GGAGAAACTG CAGAAAATGT CATCAAAATT TGTAGTCATA GTTTGGGTTT TTGTTGTGTT GATATTGACT TCAAGTTACA GTGCAAATTT GACATCGACC AAAACCATTT CTCGCATACA ATTTAGTGAG CTGCTTAGAA ACCCTTCACA ATATAGAATG CTTAGAACCA ATAGTACACT CAATACCTTT GACGACTATG TTCAAGCTTT GCGGGATGGA ACTATCTCTC ATGTTGTTAG TGAAATACCG TATCTCAATG TCTTTCTTGG ACATTATCCG GGTGTCTTCG AGATTCTAGG TAGAGACACT ACTAGCAATG GCTTTGGGTT TATGTTCCAG AAAGGCTCGG GTTTGGCTCC TAACGTGTCA AGAGAAATCG TGAAGCTAAG GTCATCACGA ATGTTGAAAG ATATGGAGAA AAGATGGTTC CAGGAGCTGG ATTCCTTTGG AAAACCACAC ATTGATTGGT CTGAAAATGA CGATGCATTT AACCGCCTCA CCATCCATGA ATTGGGCGGT TTGTTCGTCA TTGTTGGAGT TTCTCATGCT CTTGTACTAG CTTTGCATCT CTATCAGACA CGGCGAGAGA TATCACGTGC CTTGTGGGAA TCTCGACTCT TCACCAAATT GCAAAACTTC TCAGGCTTCT ATAAGTAA 
Length2478
Protein Sequence
Protein Residue
Map Locationscaffold_2: 9093291.. 9097562
Download Sequence
A.thaliana
AGI-codeAT3G04110.1
Descriptionglutamate receptor 1.1
TAIR curator summaryputative glutamate receptor (GLR1.1). Contains a functional cation - permeable pore domain. Involved in cellular cation homeostasis.
Alias[ATGLR1.1][GLR1][GLR1.1][GLUTAMATE RECEPTOR 1][glutamate receptor 1.1]
Gene coexpression
MR
MR Locus Description
15.3948 Ahg944962
15.9374 Ahg892007
28 Ahg351609 Protein of Unknown Function (DUF239)
30.8545 Ahg355644 NAC domain containing protein 63
37.5233 Ahg933351 cytochrome P450, family 710, subfamily A, polypeptide 3
38.2623 Ahg919859 P-glycoprotein 10
39.1791 Ahg479710 Receptor-like protein kinase-related family protein
46.9894 Ahg358371 Pectin lyase-like superfamily protein
51.614 Ahg496601 NAC domain containing protein 103
54.4977 Ahg348300 serine carboxypeptidase-like 37
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression