Detail



ID : Ahg318190

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|318190|fgenesh1_pm.C_scaffold_3001206
Sequence
ATGGTGGGTT TTCGCAGAGC AAGCGGAGTG CTTCTTGTGG TATTAGTGGT TATGGCCACC ACAATAGTAA ACGGGACACC GGTTGTCGAT AAAGCAAAAG ATGCAGCTGA ATCAGTTGGC GATAAAGTCA GTGAAGCAGC TACAACAGTT GGCGATAAAG CAAAAAATGC AGCTGCATCA GTTGGTGTTA AAGTACCAGG AGCCAAAGCA GGCGGTGCAT CACTTGATAT TAAAGCATCA GGAGCTAAAG GAGATGGTAA AACTGATGAC AGTGCGGCAT TTGCGGCTGC ATGGAAAGAA GCATGTGCAG CAGGGAGCAC GATTACAGTG CCAAAAGGTG AGTATTTGGT AGAGAGCCTA GAGTTCAAAG GTCCATGCAA AGGTCCAGTC ACTTTGGAAT TGAATGGCAA TCTTAAGGCT CCGGCTACGG TCAAGACCTC TAAACCTCAT TCCGGATGGA TTGATTTCGA AAACATCGCT GATTTCACTT TGAATGGAAA CGGAGCCATT TTTGACGGTC AAGGTTCCCT CGCTTGGAAG GCCAATGACT GCGCCAAAAC CGGCAAATGC AACTCTCTCC CCATCAACAT CCGATTCACG GGTCTAACAA ACTCGAAAAT TAAGAGTATT ACATCAACAA ACAGCAAACT TTTCCACATG AACATCCTTA ACTGCAAAAA CATAACTCTT GAGGATATTG GTATTGATGC ACCTCCGGAG AGTCTCAACA CCGATGGGAT CCACATCGGA AGGTCCAATG GCGTCAACTT ATTAGGGGCA AAGATTAAAA CCGGAGATGA CTGCGTTTCC ATTGGAGATG GTACCGAAAA TCTCATTGTT GAGAACGTAG AATGTGGACC GGGACACGGA ATTTCCATTG GAAGTCTCGG AAGATACCCT AATGAGCAAC CAGTAAAAGG AGTCACTGTG AGGAAATGCC TCATCAAGAA CACTGACAAT GGTGTTCGCA TCAAGACATG GCCAGGATCT CCCCCCGGTA TCGCCTCCAA CATTCTTTTC GAAGATATCA CAATGGACAA TGTTAGCACC CCCGTTCTCA TCGACCAAGA GTACTGTCCT TATGGCCACT GCAAAGCTGG GGTACCATCG AAAGTGAAGT TGTCGGACGT GACTATCAAG AACATTAAGG GTACATCAGC AACAAAGGTG GCTGTGAAGC TAATGTGCAG TAAAGGCGTT CCTTGCACCA ATATTGCTCT CGCTGACATC AACTTGGTCC ACAACGGCAA AGAGGGACCA GCTGTCTCGG CATGTTCTAA CATCAAGCCT ATTCTCTCCG GAAAGTTGGT TCCAGCGGCT TGCACTGAAG TCGCTAAAAC GGGTCCTTAA 
Length1350
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5501715.. 5503387
Download Sequence
A.thaliana
AGI-codeAT3G14040.1
DescriptionPectin lyase-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
19.0526 Ahg470425 Protein of unknown function (DUF810)
41.6413 Ahg893609 Zinc-binding dehydrogenase family protein
41.9166 Ahg474763 HSP20-like chaperones superfamily protein
44.1814 Ahg316907
45.4313 Ahg351609 Protein of Unknown Function (DUF239)
48.6415 Ahg922161
51.4393 Ahg925744
58.4808 Ahg334832 HCO3- transporter family
59.925 Ahg344061 SU(VAR)3-9 homolog 7
67.2904 Ahg946730
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression