Detail



ID : Ahg318927

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|318927|fgenesh1_pm.C_scaffold_3001943
Sequence
ATGGAGCCAA AGTGTGACCA CTGTGCAACT TCACAAGCAG TGATTTACTG CAAATCCGAT TTGGCTAAAC TATGCCAAAA CTGCGACTTC CACGTACACT CTGCGAATCC TCTATCTCAT AGACACTCAC GCTCTTTGAT CTGCCAGAAA TGCTTCTCAC AGCCAGCCGT AATCCGCTGT CTCGGTGAGA AGGTTTCATA TTGCCAAAGA TGTCATTGGC ACGCAAGCAA CTGCTCGGAT TTAGGACACA GAGTTCAGAG GTTGAACCCT TTCTCTGGTT GTCCTTCTCC AACAGATTTT GTCAAAATGT GGTCTTCAAT TCTTGAACCT TCTGTCTCTA GTTTGGTTAG TCCGTTTGTT GGTTCTTTGC CCTTGAATGA TCCCAATAAT ACCATGTTTG GAATGGCGAA AATCAACGAA TTAGACGGTT TGATCGGTTC CCCTTATTCC ATGGTGCCAC ACAGCTTCAA TGTCACTCAG AATTTCAGTG ATCAATTGTC TTTCTTTTCC GTGGAATCTA AGGGATATCC TGATTTGGTT CTTAAACTTG AAGAAGGCGA AGAAGATTTA TGTGAAGGGC TTAACTTTGA CAATGCGCCG TTAAACTTTG ACGTTGGAGA TGATATTATC GGATGTTCTT TAGAAGAACC CATAGAACCG GACCATACAG TACCAAATTG CCTACTGATC GACAAGAATA ACACATCCGT TACCGCCTCA AACTTTACTA TAGACAACAC ATCCGCATCG TCACCAGGAC AACAAATGAA CATCAACACT GGACTTCCGC TTCCTCTATC ACCTGTCTTG TTCGGACAAA TCCATCCATC GCTTAACATC TCCAACGTCA CAGGTGAAAG CAATGCAGCT GATTACCAGG ATTGTGGGAT GCCTCCAGGG TTTATAACGA GTGAAGCACC ATGGGAATCG AATCTTGAAG TTAGTTGTCC ACAAGCAAGA ACCCAAGCTA AGTTGAGATA CATGGAGAAG AAATTAAAGC GCTCTTTTGG GAAACAGATT CGATATGCAT CGCGCAAAGC AAGAGCTGAC ACGAGGAAAA GAGTGAAAGG AAGATTTGTG AAAGCTGGTG ACAATTATGA TTATGACCCA TCATCACCGA CGACAAACAA TTGA 
Length1134
Protein Sequence
Protein Residue
Map Locationscaffold_3: 9143219.. 9144603
Download Sequence
A.thaliana
AGI-codeAT3G21880.1
DescriptionB-box type zinc finger protein with CCT domain
TAIR curator summary
Alias[BBX10][B-box domain protein 10]
Gene coexpression
MR
MR Locus Description
2.23607 Ahg937768 Domain of unknown function (DUF313)
8.7178 Ahg473891
24 Ahg893817 Pectin lyase-like superfamily protein
29.2916 Ahg336202 phospholipase Cs
33.8231 Ahg323049
44.6318 Ahg913186
45.5961 Ahg891768 RAB GTPase homolog G1
48.5592 Ahg351806 Galactose oxidase/kelch repeat superfamily protein
61.4329 Ahg490601 root hair specific 17
63.0238 Ahg470978 plant glycogenin-like starch initiation protein 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression