Detail


ID : Ahg937413

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937413|scaffold_501604.1
Sequence
TTTTGACGCC GCTCATCAAT CAGATGGCAT CGATTGACAT TCCTCTTGAT CTCCAGATTA ATACACTCTT AAGATTACCT GTAAAGCCTT TATTGAGATT TCGATGCGTC TCCAAGCTTT GGTCCTCAAT CATCACTAGC CAATATTTTC AAAACCGTCA CTTTATTATT ATTACATCTT CCTCAGCTGC TCCTCGTCTT CTCATTGCTT TTCAGGACTT TCGCAGTGGA AACCTTCTAA GTAGATTAAG TGTGGGGATT TGTAACCCTA GCACAAGGCA GCTGCATATT TATCCACAAA TCAAATTCGA AAAGGATCCA TGTACTGATC CCTGGATCAT GTACTTTTTT GGGTATGATC CTGTTGAAGA TCAATACAAA GTTCTAGCCA TTCATCATTT GAGATGGAGA TTTGAGCACA AGGTTTTGGT AGTGGGAGGA GGTTGGAGAG ACGCTCCATA TCCCACCTGT CCTCATGTTG TTCGGACCTT GGGGCTGTAT ATGAACGGAA CCCTATACTA CGGGGCTTCT AGGATGGAAA TCAAGTCCCC GAATAATAAT TCTATAATTG TGAGTTTCGA TGTTAGGTTT GAAACGTTCA ACATCATCAA CGTACCAGCG GGTTATGAGA AGATGTGGAA TTGTTCATCT GAAGCGGATA AAACTTTGAT CAACTATAGA GGGAAAATTG GTGTGGTTGA GCACCCTCGT GATGGTAGTT TTCGAATGTG GGTTGTGGAA GATGCTGAGA AAGAGAATTG GTCCATGACC ACTTTTCATT TGCCCCAATC TGCTGCTGGT CTTGACTTTG AGGTCATGGA AACCGTTTAT AACGGTGAGA TTTGTCTACT TCCAAAAGAA TTGCCCGATC CGTTTTGCCC CTTCTATTAC AATTTGAAGA CGAATAGCAT GAGAAGTGTC GCAATTAAAG GACTACCTAT TTCCCAGACT AAGCCATTCC GTACCATTTT TGCGATCTTT ATGTCTTTAG AAACCTGAAG TTAATTTCGG GCTTATAT
Length1018
Protein Sequence
Protein Residue
Map Locationscaffold_5: 12452455.. 12458295
Download Sequence
A.thaliana
AGI-codeAT3G47130.1
DescriptionF-box associated ubiquitination effector family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
19.5959 Ahg478549 Jojoba acyl CoA reductase-related male sterility protein
20.7364 Ahg948378 PYR1-like 12
21.4942 Ahg316133 Protein of unknown function (DUF579)
22.2261 Ahg320180 SKU5 similar 16
24.2899 Ahg947946
25.6125 Ahg485277 O-acyltransferase (WSD1-like) family protein
33.5857 Ahg946730
36.0832 Ahg492890 Glycosyl hydrolase family protein with chitinase insertion domain
37.9473 Ahg946972 Protein of unknown function (DUF295)
47.7493 Ahg924765 PA-domain containing subtilase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression