Detail



ID : Ahg321290

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|321290|fgenesh1_pm.C_scaffold_4001347
Sequence
ATGATGATCA CAAAAAAACT ATATCAATGT ATGTGTTTAT TATGCATGGT GATTGCAATA TTAGACGTAG TGAGTAGTGA TGATGCTAAA GAGCAAAAGA TGAAGGACAA GATCATCTCT TTGCCAGGGC AACCTCCTAA CCTCAATTTC TCTCAATTCT CTGGCTACGT CACTGTTGAT TCCGCGGCTG GACGGAATCT TTTTTATTGG CTAACCGAAG CTCCTAGGCC CAGCGGTACG AAGCCCTTAG TTCTATGGCT CAATGGTGGT CCAGGATGCT CCTCCATTGC CTACGGTGCT TCTGAGGAAG TTGGTCCATT TCGGGTTAAT CCCGATGGAA AGACTCTTCG TTTAAATCTC TATGCTTGGA ACAAAGTTGC AAATGTGTTA TTTTTGGATT CACCGGCGGG TGTAGGTTTC TCTTACACAA ACACTTCGTC AGACGAACTA ACAGTGGGAG ACAAGAGGGC AGGGGAGGAT GCATATAGAT TCTTGGTGAG ATGGATGGAG AGGTTCCCTG AGTACAAGGA AAGACCATTT TACATCGCCG GCGAGAGCTA CGCTGGACAT TATATTCCGG AGCTAGCTCA ACTGATCGTC AACCGTAACA AAGGTGCCCA AAACCCAACT ATCAATCTAA AAGGGATTCT GATGGGGAAT CCCCTAGTGG ATGATTATAA TGACAACAAA GGGATGCGTG ACTACTGGTG GAACCACGGG CTTATATCCG ACGAAAGCTA CAAGGACCTG ACCAAGTGGT GTCTCAACGA CTCCATCCTA TTTCCCAAGC CCAACTGCAA CGCTGCTCTG AACCAAGCCT TGTCTGAGTT TGGTGACATC GACCCTTACA ACATCAATAG CCCTGCATGC ATCACACATT CATCATCAAA TGAGTGGATG CAAGCATGGC GGTATAGAGG GAATGATGAG TGTGTTGTGG GATATACACG CAAGTATATG AACGATCTCG ATGTGCACAA ATCTTTCCAT GCCCGCCTCA ACCGCAGTAC TCCTTGGACC CCTTGCAGTC GTGTCATAAG AAAGAATTGG AAAGACTCAC CTAAGTCCAT GCTTCCCGTC ATCAAGAATC TTCTTCAAGC TCATCTCCGT ATTTGGATCT TCAGTGGGGA CTCGGACGCA GTGTTACCGC TAAGTGGGAC AAGGCATTCG ATAAATGCAA TGAAATTGAA GAGTAGCAAA AGGTGGTATC CATGGTACCA TTCACACGGC CTAGTTGGAG GTTGGAGCCA GGTTTACGAA GATGGTTTGC TAACTTACGC GACCGTTAGA GCCGCAGGGC ATGAGGTGCC ATTGTCTCAG CCTCGTCTCG CTCTTTTCCT CTTCACCCAC TTTCTCGCCA ACCACTCTCT TCCCTCCTCT TCCTCTTAA 
Length1389
Protein Sequence
Protein Residue
Map Locationscaffold_4: 16086308.. 16088619
Download Sequence
A.thaliana
AGI-codeAT2G35770.1
Descriptionserine carboxypeptidase-like 28
TAIR curator summary
Alias[scpl28][serine carboxypeptidase-like 28]
Gene coexpression
MR
MR Locus Description
20.7846 Ahg917658 subtilase 4.13
28.6356 Ahg934840 laccase 5
32.5576 Ahg909881 NAC domain containing protein 49
37.3095 Ahg351609 Protein of Unknown Function (DUF239)
37.8286 Ahg947152
44.2719 Ahg933779 Domain of unknown function (DUF313)
50.1199 Ahg478121 Pectin lyase-like superfamily protein
63.2139 Ahg904884 RNA-binding protein
64.5368 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
68.3813 Ahg925744
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression