Detail



ID : Ahg327211

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|327211|fgenesh1_pm.C_scaffold_6002431
Sequence
ATGGCGAAAG AGAATAGTGG TCATCATCAC CAAACAGAAG CAAGAAGAAA GAAACTAACT TTGATTCTTG GTGTAAGTGG ACTCTGCATT TTGTTCTATG TTTTAGGTGC ATGGCAAGCC AATACCGTCC CATCTTCTTA CTCGAAAGTC GGATGTGAGA CGCAATCAAA TCCTTCTTCT TCGTCGTCCT CGTCCTCTTC CTCATCATCT TCAGAGTCAG CTGAATTAGA TTTCAAAAGC TATAATCAGA TTGAGTTAAA GGAAACAAAC CAAACCATCA AGTACTTTGA ACCATGTGAG TTATCTCTCA GTGAGTACAC TCCTTGTGAA GATCGACAAA GAGGAAGAAG ATTCGATAGG AACATGATGA AATATAGAGA AAGACATTGT CCTTCAAAAG ATGAGCTTCT TTATTGTTTG ATTCCTCCTC CACCAAACTA CAAGATTCCT TTCAAATGGC CACAAAGCAG AGACTATGCT TGGTATGACA ATATCCCTCA CAAGGAACTC AGTGTTGAGA AAGCAGTTCA AAACTGGATT CAAGTAGAAG GCGACCGGTT TAGATTCCCT GGTGGCGGAA CGATGTTTCC TCGTGGAGCC GATGCTTATA TTGATGATAT TGCTAGGCTC ATTCCTCTTA CTGATGGTGG AATCAGAACA GCTATTGACA CTGGATGTGG TGTTGCAAGT TTTGGTGCTT ACCTCTTGAA GAGAGACATT ATGGCTGTGT CTTTTGCTCC AAGGGATACT CATGAAGCTC AGGTACAGTT TGCTTTAGAA CGTGGAGTTC CTGCGATAAT CGGGATTATG GGATCAAGAA GGCTTCCTTA TCCAGCTAGA GCTTTTGATC TTGCTCATTG TTCTCGTTGT TTGATCCCTT GGTTTAAAAA TGATGGTTTG TACCTTATGG AGGTTGACCG GGTTTTAAGA CCGGGCGGTT ACTGGATCCT TTCGGGACCA CCGATTAACT GGAAACAGTA CTGGAGAGGG TGGGAGAGAA CAGAGGAGGA TTTGAAGAAA GAGCAAGATT CAATAGAAGA TGTAGCAAAG AGTCTTTGTT GGAAGAAAGT GACTGAAAAA GGTGACTTAT CCATTTGGCA AAAGCCTCTC AATCACATTG AGTGTAAAAA GCTCAAACAA AACAATAAGT CGCCTCCGCT ATGTAGCTCA GATAACGCGG ATTTCGCTTG GTACAAAGAC TTGGAAACTT GCATAACACC ATTACCAGAA ACAAACAATC CAGATGAATC AGCAGGCGGT GCGCTTGAGG ATTGGCCAGA CCGAGCATTC GCGGTTCCTC CAAGAATCAT CAGAGGAACT ATACCAGACA TGAACGCGGA GAAATTCAGA GAAGACAATG AGGTTTGGAA AGAGAGAATA ACACATTACA AGAAGATAGT CCCAGAGCTT TCACATGGAA GATTCAGGAA CATAATGGAC ATGAACGCTT TCCTCGGCGG ATTCGCTGCT TCCATGCTGA AATATCCCTC ATGGGTCATG AACGTTGTCC CAGTCGATGC AGAGAAGCAA ACACTAGGTG TGATCTACGA ACGTGGATTG ATTGGAACAT ATCATGACTG GTGTGAAGGA TTCTCAACAT ATCCAAGAAC TTATGATATG ATTCATGCAG GAGGATTGTT CAGCTTATAC GAACACCGGT GTGATTTGAC GTTGATATTG TTGGAGATGG ATCGAATATT GAGACCAGAA GGAACAGTTG TGTTGAGAGA TAATGTGGAG ACGTTGAACA AGGTAGAGAA GATAGTGAAG GGAATGAAGT GGAAGAGTCA AATAGTGGAT CATGAGAAAG GTCCTTTTAA TCCTGAGAAG ATTCTTGTTG CTGTTAAAAC TTATTGGACT GGCCAACCTT CTGAAAAGAA CAACAACAAC AACTAG 
Length1896
Protein Sequence
Protein Residue
Map Locationscaffold_6: 19234828.. 19237017
Download Sequence
A.thaliana
AGI-codeAT4G10440.1
DescriptionS-adenosyl-L-methionine-dependent methyltransferases superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
21.9089 Ahg951906 MATE efflux family protein
26.3818 Ahg337685 histone acetyltransferase of the CBP family 4
39.5727 Ahg356074 expansin A24
48.8876 Ahg904968
52.7257 Ahg949069 transposable element gene
67.3498 Ahg942300
71.7077 Ahg904884 RNA-binding protein
91.9184 Ahg351609 Protein of Unknown Function (DUF239)
92.8655 Ahg944327 zinc finger (C2H2 type) family protein
93.5307 Ahg316947 Pectin lyase-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression