Detail



ID : Ahg327841

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|327841|fgenesh1_pm.C_scaffold_7000068
Sequence
ATGTTTGATA TCATTCTCGC CATTGCAGTT GAAAGTAAGA GAATGGAGAG TGGTGGGCTG TATGAAAATG GGCGCTACAA GCCCGATTAC AACAAAGGGA CACAATCTGT GAATATGGTG CCTCAGCATC AGATAAAGGA GCAACATAAT GCATTGGTGA TGAATAAGAA GATCATGTCC ATCCTTGCTG AGAGGGATGC AGCAGTCAAG GAAATAAACG AAGCCGTAGC AGCAACAAAA GAAGCATTAG CCGCTCGTGA TGAAGCACTT GAGCAGCGGG ACAAAGCTCT CTCTGAAAGA GATAATGCTA TCATGGAGAC AGAAAGTGCG TTAAATGCTC TTCGATACCG TGAAAACAAT CTTAACTACA TTTTGTCGTG TGCCAAGCGT GGTGGTTCCC ACAGTTGTGT AACTGACGAA AGCCACTTAC CTGCCCCTTC ACCTATATCA ACTATTCCAC CTGAAGCAGC CAACACGAGA CTAGCCAAAA GGAAGAAAGA GAGTAAGCAG GGAGCACGAT CAAAGGGAAA GAAAGTGGGC GAGGATCTGA ACCATCAAGT TGCTTCTCCG GGAAAGAAAA GCAGAAAAGA TTGGGACAGT TACGATGTCG GTTTAAACCT AGTCACATTC GACGAGACGA CAATGCCAGT GCCCATGTGC ACTTGCACCG GGACTGCTCG TCAGTGTTAC AAGTGGGGAA ACGGCGGTTG GCAATCTTCT TGCTGCACAA CCACTTTGTC TCAGTATCCG CTCCCGCAGA TGCCAAACAA GCGGCATTCT CGAGTGGCCG GTAGGAAAAT GAGCGGAAGT GTCTTCTCCA GGTTACTTAG TCGTTTAACA ATTAGGTTCA AAAGTCGAAT GAAAGATGAA GCTAGGTTCG TTATTGTTTT TACTGTCGAT AGTTCCGTTA ATGCAAATAT TTTAGTACTA GTATTTTTTG CCACATTTTT CTCTGGAATC GCTTTTGCTT TTGAATGGAC ATTTCACGGC AAGAACCATA GCGGATTCCA ATGGATCATC TACTACGCCT TGTCACTGAT CATTCTTCCT ATTCTCATCT GGCTAGGTCT CGGTATTGTC ATGATTGTTT CGTCAAGCCA CGGATCAATG CAAGTTGCTA GCGTAGCGGT GGAAGAAGAA CAGTGTGTCA ACAGTTTTGC CGAGAATAGT GGGAATGAAG AAACTAAAGA AAACAATTGT GAGAGTTTGG CGATTGTGGT TGATTCAGAT AAAAAAAAGT GCACCGATAA AGTATTTGAG AATAAAACGG CAAAGCTAAA ACGCACAGTT TCATTCCCAT TGCATAGCCA TGTGCGATCA TGTCGGACTA GGTGA 
Length1335
Protein Sequence
Protein Residue
Map Locationscaffold_7: 270769.. 272685
Download Sequence
A.thaliana
AGI-codeAT4G38910.2
Descriptionbasic pentacysteine 5
TAIR curator summaryThe current TAIR8 structure of this gene is incorrect. The corrected structure, which will be visible in TAIR9, indicates that this gene could possibly be a pseudogene.
Alias[ATBPC5][BBR/BPC5][BPC5][basic pentacysteine 5]
Gene coexpression
MR
MR Locus Description
39.5348 Ahg916296
47.592 Ahg907322 Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit
69.1809 Ahg338146 KNOX/ELK homeobox transcription factor
75.1399 Ahg486975 laccase 8
91.1043 Ahg478549 Jojoba acyl CoA reductase-related male sterility protein
98.8635 Ahg475042 Pentatricopeptide repeat (PPR) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression