| Annotation |
|---|
| Description | jgi|Araly1|328538|fgenesh1_pm.C_scaffold_7000765 |
| Sequence |
ATGGCTAGTT TGGTGCACAG GTTACGTCCA CGAACGGGGC CAAAACCCGT TTACACATCA GAAGACGATA TGGATGAAGA CTTTGTTCTC GAAGATACAG TCGGAAGTAA AGAAGAGGTT TGTCCTCTTG GCGAGGTTGA AGCAATTTTG GACCGTGAAT TGTGTCCTAC TGCATCTAAC GATCCGGATT CTTCTGACAA CGGGACACCA ACCCAAGTTT TTGTGAAACA ATATCAGGTG AAGTGGAAGG GAAAATCGTA CCTGCACTGC TCTTGGGTGC CCGAGCAGGA ATTCGAGAAG GCTTACAAGT CCCATCCTCG TTTAAAATTA AAATCAAGGG TCGACAAATT TAACGCTGAC AAGGACAAAT TCATCGCTGA GAACGGAGAT GAGTATATTG CCATTCGTCC TGAGTGGACA ACTGTTGACC GGATTATTGC TTGCCGGGGA AGAGGTGATT TTAAGGAGTA TCTAGTTAAG TACAAAGAAC TTTCTTATGA AGAAAGTTAC TGGGAATCAG AATCTCTCAT CTCAAAGTTC CAGAACGAAG TTCAAAGGTT TAAGGATATA AACTCTCGCT CTCGTAGAGA TAAATATGTC GGATACAAGA GAAATCAAAA GGAATTCAAA CAGTTTGAAC ATACTCCTGA ATTTCTTACA GGCACATTGC ATACATACCA GCTCGAAGGG CTGACTTTCT TAAAGCATTC ATGGTCCAAG GGAACCAATG TAATCCTTGC GGATGAAATG GGACTAGGCA AAACTATTCA GAGCATTGCC TTCTTGGCTT CTTTGTTCGA GGAAAACTTA TCTCCTCATC TAGTTGTTGC TCCTCTCTCA ACCCTCCGTA ACTGGGAGAG GGAATTTGCC ACCTGGGCAC CACATATGAA TGTGGTTATG TACACTGGGA CTTCGGAAGC ACGTGATGTT ATTTGGGAAC ATGAGTTCTA CTTCCCTAAA GGGCGTAAAA TTAAGTTTGA TGTCCTCCTC ACGTCATATG AGATGATTAA CCAAGACACA TCAGTTCTGA AACCAATCAA GTGGACGTGC ATGATTGTTG ATGAAGGCCA TCGGTTGAAA AATAAGGATT CAAAGCTATA CTCTTCATTG AATCAGTTTA CGAGTAAGCA TCGCGTTCTG TTGACCGGAA CACCACTTCA GAACAACTTG GATGAACTTT TCGTTCTCAT GCATTTTCTT GATGCCGTCA AGTTTGCGAG TATGGAGAAC TTTCAAAAGG AGTTTAAGGA TATAAATCAA GAGAAGCAGA TTTCAAGACT CCACCAAATG TTGGCTCCAC ATCTGCTTAG AAGGTTAAAG AAAGACGTGC TCAAGGATAA GATGCCCCCA AAGAAGGAGC TCATTTTGCG TGTTGATCTG AGCAGCCAGC AAAAAGAAGT GTACAAAGCT GTTATTACCA ATAATTATCA AGTCTTGACA AAGAAACGAG GTGCTAAAAT ATCTAACGTG CTAATGGATC TACGCAAAGT TTGCTCTCAT CCGTATCTGT TAAAAGACGT TGAGCCAAGA CTTGAAGACG CAAATGAAGC TTTTACAAAA CTCTTGGAAG CTTCTGGAAA GTTGCAATTG TTAGACAAAA TGATGGTCAA ACTCAAAGAA CAGGGGCACA GAGTGCTAAT CTATTCACAA TTCCAACACA CGCTTGACCT TTTCCAAGAT TACTGCAGTT TCAAGAGTTG GAAATATGAA CGGATTGATG GAAAGGTCGG TGGAGCTGAG AGGCAAGCAA GCATAGATCG GTTTAATGCA GAAAAGTCTA ACCGGTTCTG TTTTTTGCTC ACTACAAGAG CTGGTGGAAT AGGAATAAAC CTTGCAACAG CTGATACAGT CATCATTTAT GACAGTGATT GGAATCCTCA TGCTGATCTC CAGGCTATGG CTAGAGCTCA TCGTCTTGGC CAAACAAATA AGGTCATGAT TTACAGGCTC ATTCACCGAG CTACGGTGGA AGAGCGGATG GTGGAGATTA CTAAGAAGAA GATGCTTCTA GAGCATCTCG TAGTGGGGAA TATGGAAAAC CCACATCTTC GGCAGGACGT GTTAGATGAC ATCATCAAAT ATGGTTCCAA GGAGCTTTTC TCTGAAGAGA ATGATGAAGC AGGGAAGTCT GGAAAAATCC ATTATGATGA TGCTGCTATT GAAAAGTTGC TTGACCGTGA TCATGTAGAT GCTAAGGAGG TCTCACTGGA TGATGAGGAG GATAATGGTT TTTTAAAGAA TTTCAAGGTG GCCACTTTTA AGTATATAGA TGACAATGAG GCTGCAGCAT CAGAGGAGGC ACAAGCTATT GAAAACAATT CTTCAGATAG AACAAGTCAT TGGAAAGAGT TGCTAAAAGA CAAATATGAA GTGCAACAAG CCGAAGAGCT CAATGCTCTT GGAAAGAGGA AGCGAAACGG CAAGCAGGTG ATGTATGCTG AAGAAGATGA TCTTGATGGT TTAGAAGTGA CCTCTGATGA GAAGGAGGAA GATTATCTTG ATGATTTAGA AGTGATCTCT GATGAGAAGG AGGAAGCAGA TGACGCCGAG CCAACTGTTG TTAAAGCAGC TCGACAGAGA AAGCCGAGGA CGGTTACAAA GCCTTACAGA AAAAGGAATC GCGATAAATC GGAGTTACCT GTGATGGAAG GCGGAGGGAA ATCTTTCGAG GTGCTAGGTT TTAACAGGAC TGAAAGGGAA ACCTTTTTAC GTACGTTTAA GAGGTATGGA GCTGGAGACT TTGATTGGAA GGAGTTTATT CATCCCTTAC ATATGAAGAC CTTTGACGAG ATAAATAAGT ATGGAATATT GTTTTTGCAA CACATTGCCG AAAACTCTAA GAATAATTCT TCAACTTTTT CAGTTATTTC GGCAATGGTC TCTGCAGATG GAATTCCGAA AGAAGGGATA AGAAGTGACG AGCTACTAAT GAGCATGACT TTTATGATGC TATTAAAGGA GAAGTGTCAA TTTTTGGACG ACCATCCGAC AGAACCCGTT TTCCGTGACT ACAGCATCAG AAAGTACAAT TTGAGAAGTG GAGCATTTTC TAAGGAAGAA CATGATAGGA TATTGATTCC TGCTGTTGCC AAGCATGGAT ATGGAAACTG GACGGCCGTC GTTGAAGACG AAGAGATAGG GTTCCAAGAG GTTGCCCGAA AAGACCTGAA TATCCCTTTC CCTTACACAG ATGCTGAAAT TTCTCTTATA AGAATTCGTG ACCATGTGGG AAAACGGTTT AAGAAGATGG AGGATGCGAT CAAGTATGAG TACACAGAAA ATGTACATAA GGAACAAGCA GAAGCTAGAA GAAAGATGAT GGATACAGCG GGACCGAGCT TTGCAGCTGC AGACAAAGAA ATGCTTGATG AACTGCCTAA GAATGATCCC ATCATTTCAG AAGAAATTTC TGCAGCTGCC GTAAACAACA AGCAAACTAG GGTTGAAGTG GCTCAACCAT ACAATCAGAG TGTTAATTAT GGGAATTCAG GGATGCCATT CGAGACATAT TTAAACATTC AACCGCTGAC TCGAATGCTG AGGGAGAGCT TTATACCTCT GGAACGTATC AGTGAAAGAA TAAGTGATGG GAGTCATTCC AGAAGCGCCG GGACAGATCA TGATGTTGAG ATGGATGCAG CGGATAACGT TATTGTGTTG GATTGA |
| Length | 3666 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 3834449.. 3846209 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G31900.1 |
| Description | chromatin remodeling factor, putative |
| TAIR curator summary | |
| Alias | [CHR7][PKR2][chromatin remodeling 7][PICKLE RELATED 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 26.9072 |
Ahg477013 | Terpenoid cyclases family protein |
| 42.2137 |
Ahg351608 | Protein of Unknown Function (DUF239) |
| 44.7661 |
Ahg319046 | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain |
| 46.5833 |
Ahg330052 | |
| 48.3115 |
Ahg949205 | transposable element gene |
| 58.6345 |
Ahg899837 | Domain of unknown function (DUF313) |
| 59.2621 |
Ahg489727 | KNOTTED-like from Arabidopsis thaliana |
| 62.3538 |
Ahg936073 | RING/U-box superfamily protein |
| 64.3428 |
Ahg914348 | Regulator of Vps4 activity in the MVB pathway protein |
| 80.2309 |
Ahg486223 | Protein kinase superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|