Detail



ID : Ahg332869

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|332869|fgenesh1_pm.C_scaffold_8002212
Sequence
ATGGACTATT CAAAAAATGT TCAAAACGAA AATTTCACCC TTGTTTCACA ACCTTCTTAT TTGACAAGAG ATCAAGAGCA TGGTATCATG GTCTCTACTT TGCGACAAGT GATATCCAAC ACTGGAGGTG ATACGTCATC ATCTCACTGG ATTGCAAGTG AAGCTCTTCC ACCTCCGGAC GCTGGCCCTT GTCCTCTTTG CGGCGTCACC GGTTGCTACG GGTGCGCATT CCCACGGCAT GAAGAGGTAA AGAAGGAGAA AAAACACAAA GGAGTGAGGA AGAAGCCATC AGGAAAATGG TCTGCGGAAA TATGGGATCC GAGTATGAGA GCAAGGAGGT GGCTTGGAAC GTTTCCAACG GCGGAGATGG CAGCGCATGC TTACGATGAG GCAGCGGCTG AGCTTGTTGG AAAAAGATCA GCGAGACGTG GCACAAATTA A 
Length441
Protein Sequence
Protein Residue
Map Locationscaffold_8: 21149448.. 21149979
Download Sequence
A.thaliana
AGI-codeAT5G67010.1
DescriptionIntegrase-type DNA-binding superfamily protein
TAIR curator summaryencodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.
Alias
Gene coexpression
MR
MR Locus Description
3 Ahg923695 RING/U-box superfamily protein
7.93725 Ahg952525 Carbohydrate-binding X8 domain superfamily protein
9.38083 Ahg471403 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
14.8324 Ahg949463
15.7162 Ahg947454
16.1245 Ahg897428 Protein kinase superfamily protein
18.1659 Ahg918741
18.4391 Ahg928020 F-box and associated interaction domains-containing protein
18.5472 Ahg952099 casein lytic proteinase B2
19.8242 Ahg936444 LETM1-like protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression