Detail



ID : Ahg337099

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|337099|fgenesh1_pg.C_scaffold_1003664
Sequence
ATGGTGAGCA GAAGACGCCG ACCATCAAGT TTTTCCTCTC CGCGTTTCTT CTCGCTCTCT TCCAGTTCTC TCAAATCTTA TTTGGTGTTT CTTCCTCAGG TAGCGGTTCA GAATCTGAAG GAAGCAGAGA TCACGGAGCA GGATTCGCTA CTTCTGACCA AGGATTTACT CCGTATTGCT AAATTAAACA TCAGAGTCCT CTTTCATGAG AACGATGCTT TAGATATGAA GATCAAGACG CTAAGGCAAG TCGACACTGA ACCACGGCGA TTAATTGACT GGAATTGGAT GGAGAAAGGA GTCAACGATG CGCTGCAGAG GAAATATTTG AAGACGCTTG TCTTCTGCAT TCGTGATGGT CCGATGATTG AGGAATACTC ATTTTCTTTC AGCTATTCAG ATTCTGGCAG CCAACATGTC ACTATGAATG TCAATCGTAA TGGAAATAAG AAACATGAAG GAACCCCCAA TCAAATGAGT ACTTCAGCTT GCAAAATGGT CCCTACACTA GTTCAGCTGT TGAGGACTCT TGACAAAACG CCAGACAAGC GCACCATTGT GATGAAGCTT CTTTACTACG ATGATGTGAT GCCACCAGAT TATGAGCCAC CTTTCTTCAG AAGCTGCACA GAAGAAGAAT CTAATTATGT ATGGACAAAG GATCCTATGA TAATGGAAGT TGGGATTATT TATAGGAAAC ATCTCGTGTT AGCTTTAACG GTCAAGAGCT TGCTTGATCC CTCTGAGGAT GAAAATGATG ACATGCAAGA GCATGGGAAG AGCACAAAAC CTGATTGTGT ACATGACAAC CAGCCTTCTG ACACTGATAC AGATAGCGAG GTTGAAAGAG TCTTTCTTTT CTCATCTGAT GTTTATCTAA TCTATACATC CAACGTGCAT TACAAGAAAC AAGCAGATGC CAATAATGGG GAGGTCGATG AAGATGCCAC ACAGAATCCG CTTGAAAATG AACAGCAGTT AGCAAGGGTG AAGAACTCAC GTCAGCTCGA TACTCTGGAG CTCACAGATA TTCTTTCATA CTTCCAAGAT ACCTCACTTG TTCTATCTGA AGATTTCATG GATCAGCTCG AGAAAGAAGG AGTTCTTTCG AAAACGGGAG AGGATACGTA CATTAGAAAC AGAGATAAGG CTGCGAGTTT GAGAATTGCA GGGGGACCTA GAATCCCAAA GGTGCAGCGG CAATATCTCA AGAGAGAAGT GAATGTCTTG GGAAGCAGCA GGGATGTTGA TTTTTCGAGA CCCAGACCAA GAAAAGACAG AGGCAGACAG AATGTTCAAT GCATCTACTT TAATAGTGGA TATTGTCGAT ATGGAAACAG TTGCAAGTTT TCACACCGAA TTAGTGGAGA GGAAAAGACC AGTTCTGTTG CAACGATAAT GAAAATCCCT GAAAGGAAAA GAATACTTTC TGAACTTCCA GAGAAGATAA AGAAAGATAT GGAGTCCGTC AATATTTCAG AGAAATATGC GAAGACATGC CTCGGTGAGA AGAGATATGG GTTCATAAAG GAAACGAAAC GGATTGGTTC ACTAAAAGTA TCAGACGATA AGAAGTTTAT CGTTATCTAC TGGATGACAC AAGGAGTGCT AGAAGTTTTT CTACTAGACG AGGAGACCAG GGAAAGGCTC AAAGATGCAT CTGGCTATAT TCGAGACCAA GGTACCCATG ATCTTTGCTG GACTTATGTC AGCTCTGACA TGGTAAGCGC CTCCAGAAAA CTTCATGGAT GGGATTTAAA ATATACACCC CTGTGTACAA GGTATTTATG TCAAAACCTT GACCCAGAAG ATTACAGGGG ATCTCTCAAA CGTTGTGATG AAGATGGTGG TGGTCATCGT TGTTATGAAA ACGATGTAGA AAGTACTTTG GCCTACATTC AAAAATTTGG CATACCCGAA GAAGAAGAGG GCAAGGAGGT TTTTGTATGT AGGGATAGAC GTGTTCTCTG TAAAGAGGAT GAACTCCACA AGATTACTGG TATTTTTAAA TACCCAACTC TTGAGGAAGC TTTGGTTCGT CTTCGAACAC ATCCTGTTGG TGCGACACTA TTAGGGTTTG ACGGTTGGGA TGGAGATCAG ATTTATCGTG GGCCGTGTAG TAAAAGAGCT AAGTTAGCAG GGCTACATGG GGTAATAATG ATTGATTGCT TGAAAATTCA TGGCGAAACC GTTGTTGTCT GTAAAAGTAG CAGTGGAACG GATCTTGGGA TGGAAGGTTA TAAAGGTTAC ATCGTTGTCT CTGTCCAAGT CATGTTAATG ATAGCTGGTA AGACAGAGAC TGAAGAAAAT AGGGGTCACC GTAATTGCCA AGTGAAGCCA CAACACCTTC TATATGACTT CTATTCTGTG GATATGGACT ACAAAGAACC ACGATTTGAC AAAGAGGATA CAGAGCAAAA AAGAAAGAAT GAAAAATTCA AGGTCAAAAT TGAAAGATAT AGTCAGCAGG TTCCCCCTAG GATTCAAGGA GATCATAAAC GTAAACAACA TCAGAAACAT GGAAAACCTC AGAAACGTCA TAACAACTTA TCTCTTAGAG GAACCAAGGA CTCTGACTCC GTTGTCATGG ATTACGTTGA GAATGTCTCT GGTGTCAAGG TCTTTGATCC ACATCATCAC CACATTGATC AAATGACAAT CCCATCAAGT CTTGTAGAAG ACGTTTATGA TTGTTGGTTT GAGAGTGGGT CAATGCCTTA TGCGCACATC CATTATCCTT TTGAAAACAA GGAGCTTATT GAGAAAAATT TCCCTGGTCA TTTTGTAGCT GAAGGGCTTG ATCAAACTCG AGGATGGTTT TATACTCTTA TGGTGTTGTC AACTGCATTA CATCGAAAAT CAGTGGTTCG AAATGTGATT TGCAATGGTC TTGTGCTTGC TGAGGATGGA GAAAAGATAA GTAAGAAATT ACAGAATTAT CCACCACCTT TGGATCTCAT AGATGAGTAT GGAGCTGATG CTCTGTGGTT GTACCTGATA AATTCTCTGG TTGTTCACGC TGAGCCACTA CGCTTCAAAA AAGGAGTACT TGGTGTTGTC AAAGATGTGT TGCTTCCATT TACATGGTAC AATGCAGATG GGTTCCTTGT TCAGAATGCA AGGAGACTTG AGATTGAAAG TTGTGGGCCC TTTGTTGCTA GTGATCTGGA AGCTTTACAA TCATCAAACG TTCTCGATCA GTGGATTCAG TCAGCTACGC AGAGTCTTGT CCATTTCTTC CGCCAGGAGA TGGATGGATA TCGGCTTTAC ACTGTACATG TCATCTTCAT CATGAATCAT GACATGGTGT GCTCATTACT TCTTGCAAAG TTTTTACACC TTTCTGCACT GAAACAGAGA GGGGAGATGA TTGAGCAACG TGTTACATGG ATGATGACAA TCATCGATCT TTCTCGGAAC ATTCATGAGC GTCACAGCGT AAAGGAAATG ATTGTAGCTC ATCGAGATGC AGAATTCTTG AATGATATGT AA 
Length3492
Protein Sequence
Protein Residue
Map Locationscaffold_1: 24555722.. 24562686
Download Sequence
A.thaliana
AGI-codeAT4G10320.1
DescriptiontRNA synthetase class I (I, L, M and V) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
44.3959 Ahg487136 iron regulated 2
46.2385 Ahg472435 Galactosyltransferase family protein
47.2017 Ahg947786
53.7401 Ahg944354 Transducin/WD40 repeat-like superfamily protein
74.4983 Ahg939874 Ankyrin-repeat containing protein
92.2605 Virus0426
92.2605 Ahg923468
92.2605 Virus1295
99.2119 Ahg489727 KNOTTED-like from Arabidopsis thaliana
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression