Detail



ID : Ahg338960

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|338960|fgenesh1_pg.C_scaffold_2001059
Sequence
ATGTCTTCTT CCAACAATGA TGGTAATAAC AATGGAGCGT ACCCTCTCTC TCTTTACCTT TCTTCACTCT CTGGCCATCA AGACATCATT CATAATCCAT ACAACCATCA GTTAAAAGCA TCTCCGGGCC ATATGGTATC AGCAGTTCCT GAATCTCTGA TCGATTACAT GGCGTTTAAC TCAAACAATG TTGTGAATCA TCAAGGCTTT GAGTTTCCTG AGGTGTCCAA GGAAACCAAG AAGGTGGTGA AGAAGGACCG ACATAGCAAG ATTCACACGG CACAAGGGCT TCGAGACAGG AGGGTTAGGC TTTCTATTGG GATTGCTCGC CAATTCTTCG ATCTTCAGGA TATGTTGGGG TTTGATAAAG CCAGTAAAAC GTTAGACTGG CTGCTCAAGA AATCAAGAAA AGCCATCAAA GAGGTCGTAC AAGAAAAAAA TCTCAACAAT GAAGATGAAG ATTTTGGAAA CAATGGAGGT GATGTGGAAG AAGAGGAGGA GGAGGAGGAA GATGGCGATA AGAGTTTTTT GTATGGTTCA AGCCCCGATT CCTGCGGAGA AAAAGTGGTA TGTGAGGTCA AGAAGGCAGA GAAGAGAAAG AAGAAGAGTG AAGTAAGCAA CATGTCATCA GAGGGATCAA GAGCCAAAGC TAGAGGAAAA GCAAAGGAGA TGGCCTATGA CCATCCGGAA ACCGTCTCAG ATATCACACA ATCTGAAATC ATGGACCCAT TCAATAGGTC TATAATCTTT AATGAAGGAG AAGACATGAC ACATTCTTTC TACAAGGAAG CAATCGAAGA GTTTGATATT CAAGAATCTA TCTTAACCAC GAGAAGGTTC AATCTACCGG CGAATATGGG TGAAAGTTAC AATCAACGTA ATGGGACATT TATGTTGATA GATCAAGGTT CTACCAGCAA CTACAATGCC ATTGATCTGC CTCAAATTTT GGATTATAAC TATGATCAGA ACCCTTTTGT TGACCAAAGC TTTTGTGCAG TCACCGACAC GAATTTCCCT AGAGGGTTCC CATAA 
Length1035
Protein Sequence
Protein Residue
Map Locationscaffold_2: 11582778.. 11583905
Download Sequence
A.thaliana
AGI-codeAT1G67260.1
DescriptionTCP family transcription factor
TAIR curator summaryEncodes protein with TCP (TB1,CYC,PCF) domain which is likely to be involved in DNA binding and protein-protein interactions. Based on genome analysis, there is a 9-member gene family that possesses this domain in Arabidopsis. Orthologue of Antirrhinum gene CYCLOIDEA.
Alias[TCP1]
Gene coexpression
MR
MR Locus Description
23.1733 Ahg316947 Pectin lyase-like superfamily protein
38.2623 Ahg337343
39.9124 Ahg358371 Pectin lyase-like superfamily protein
42.0714 Ahg351609 Protein of Unknown Function (DUF239)
49.8999 Ahg334832 HCO3- transporter family
51.3809 Ahg473769 Protein of unknown function (DUF793)
55.2268 Ahg907331 Mannose-binding lectin superfamily protein
58.7367 Ahg352619
64.5368 Ahg495065 ethylene response factor 110
64.8074 Ahg920128
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression