Detail



ID : Ahg340454

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|340454|fgenesh1_pg.C_scaffold_3000217
Sequence
ATGGCTCAGA AATGTGCGAT TGGTTTGATT TCAGCCCTAG CAGCATCGGC TTCTCTTGCG CAATCTAAAG TCGCTTCTGC AGATGGTCCT TTCAATCTCT CTGGATTCTC TACTTCTGCG AATCCTCAGC AGCAGCCGCC GTCTCAAACT CAGAAGCCAC CGTCGACAGC TGCTGAAGAA TCTTCAGCTC CTCCGCGAGC TCGGAATGAT AATCCTAGGA CGAGTTCCGG TGGTTTCGAT CCGGAGGCAC TGGAGCGAGG TGCTAAAGCC TTGAAAGAGA TTAACAATTC CTCTTACGCG AAAAAGGTTT TTGAAAGTAT TAAGCAGCAA GAAGAGACAA AGCAAACTGA GTTTGCAACC AAGGCGCAAG AGTTTAAAGC TATGCAAGCA CAAGCTGAAA CTGAGAGGCA TAAGGTTATA TATGATGAAC AGAAAAAACT TGCTCAGCAC CAAGCACAGA CAAAATCACA GATGGCCCGT TATGAAGATG ACTTGGCAAG AAAGAGGATG CAGGCATGTA ACTCTCAAAA CAATTTTTCA ACACTGGCCG AGAATGAGTT CCATAGAGCA AGAAATCAAG AACTTGTGAA AATGCAAGAA GATTCGGCAA TTAGGCAGGA ACAAGCTCGA CGAGCTACTG AGGAGCAGAT CCAGGCGCAG AGACGACAAA CTGAGAGGGA GAAGGCTGAG ATTGAACGTG AGACCATCAG GGTCAAAGCT ATAGCAGAAG CGGAAGGAAG AGCCCATGAA GCTAGGCTTG CTGAAGATGT AAACAGAAGA ATGCTTGTTG ATCGTGCAAA TGCAGAAAGA GAGAAATGGG TTGCTGCCAT AAACACAACA TTTGACCATA TTGGAGGCGG TTTACGTGCA ATTCTGACGG ATCAAAATAA ACTGGTTGTT GCTGTTGGGG GTGTAACTGC TCTAGCAGCT GGAATCTACA CAACGAGAGA AGGTGCAAGG GTCATCTGGA GCTATGTGGA CAGAATATTA GGACAACCAT CGTTAATCCG AGAATCATCA AGAGGCAAGT ACCCTTGGTC TGGTTCGCTT TCTCGTGTAA TGTCCACATT GCGGGGTAAG GAGCCAGCTT CCAAAAGTGG ACAAGGGTTT GGTGATGTTA TTCTGCATCC TCCCCTTCAA AGGAGAATTG AGCACTTAGC TAATGCAACC GCCAACACAA AACTCCATCA GGCTCCTTTC CGAAATGTGC TTTTCTACGG TCCTCCAGGA ACAGGAAAAA CAATGGCTGC TAGAGAGCTG GCTCGTAAAT CTGGTTTGGA TTATGCACTG ATGACTGGTG GAGATGTTGC TCCCCTTGGA TCTCAGGCTG TTACAAAAAT TCACGAATTG TTTGATTGGG GCAAAAAGTC TAAGAGAGGT TTATTGCTCT TCATTGATGA AGCCGATGCA TTTTTGTGCG AGAGGAACAA AACATACATG AGTGAAGCCC AAAGGAGTGC TCTAAATGCT CTTCTCTTTC GCACGGGTGA TCAGTCCAAA GACATAGTCT TAGCACTTGC TACTAACCGA CCTGGTGACC TAGACTCAGC TGTGGCTGAC CGTGTCGATG AAGTTCTTGA ATTCCCCTTA CCTGGAGAAG AAGAGCGGTT CAAGCTTTTA AACCTATATC TAGAAAAGTA CATAGCTGAG GCTGGTCCAA AAAAGCCGAG TTTGTTCGAC CGCCTCTTCA AGAAAGAACA GCAGAAGATC GAGATAAAGG GTGTCACTGA GGAGCTCTTA AAGGAAGCAG CTGCAAAAAC CGAAGGGTTT TCAGGTAGAG AGATTGCGAA ACTGATGGCA AGTGTTCAAG CAGCTGTTTA TGGAAGTGAG GACTGTGTGT TGGACTCTGT GCTATTTAGA GAGGTTGTTG AGTACAAAGT TGCAGAGCAT CAACAGAGAA GAAAATTGGC TGGAACGGAC TCGAAATGA 
Length1929
Protein Sequence
Protein Residue
Map Locationscaffold_3: 810207.. 813491
Download Sequence
A.thaliana
AGI-codeAT3G03060.1
DescriptionP-loop containing nucleoside triphosphate hydrolases superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.4641 Ahg893605 AAA-type ATPase family protein
11.7473 Ahg924591 GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative
12 Ahg321477 phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase, putative
13.4164 Ahg491917 prohibitin 1
14.4568 Ahg927712 Pentatricopeptide repeat (PPR) superfamily protein
15.2971 Ahg894080 RNA cyclase family protein
15.9687 Ahg492264 fibrillarin 2
16.4924 Ahg484880 histone deacetylase 3
18.3303 Ahg353700 DNA topoisomerase, type IA, core
18.3848 Ahg476762 Pseudouridine synthase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression