Detail


ID : Ahg927712

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927712|scaffold_300169.1
Sequence
GTTTCAGTTC GTTATGAGTC ATGGCGGAGA ATCTCAGATT CTTGCGTATG AACAGAGCAG TGGAATGTGC GAAGCAAGGA GCGTTAGAGT TAGGCAAGCA AGCTCATGCT CATATGATTC TATCTGGGTT TCGTCCGACT ACATTCGTGC TCAATTGTTT GCTGCAGGTG TACACAAATT CAAGAGATTT CGTGTCTGCT TCTATGGTGT TCGACAGAAT GCCGCTGAGA GATGTTGTTT CGTGGAACAA AATGATAAAT GGTTACGCGA AGAGCAATGA CATGGTTAAA GCGAGTTTTT TCTTCAATAT GATGCCTGTG AGAGATGTTG TGTCTTGGAA CTCAATGCTT TCTGGGTATC TTCAGAACGG TGAGACTTTG AAATCTATCG AGGTTTTCGT CGACATGGGG AGAGCAGGAA TTGAATTTGA CGGTAGAACT TTTGCAATTA TTCTTAAAGT GTGTTCCTGT TTAGAGGATA CCAGTTTAGG AATGCAGATT CATGGGATTG TTGTTCGAGT GGGTTGTGAT ACTGATGTGG TTGCTGCAAG TGCGTTGTTG GATATGTATG CAAAAGGCAA GAGATTTGTC GAGTCTCTTA GAGTGTTTCA AGGTATTCCC GAGAAGAACT CTGTCTCGTG GAGTGCTATA ATCGCAGGTT GTGTTCAGAA TAACTTGTTG TCCCTTGCTT TGAAGTTTTT CAAGGAGATG CAAAAGGTAA ATGCTGGAGT GAGCCAGTCA ATTTACGCTA GCGTCTTGAG GTCATGTGCT GCGTTATCCG AATTGAGGTT AGGCGGTCAG TTACATGCTC ATGCCTTGAA GTCAGATTTT GCAGCAGATG GTATAGTGAG GACGGCGACA TTGGACATGT ACGCAAAGTG TGATAATATG CAAGATGCTC AAATTTTGTT TGACAAGTCA GAAAATCTTA ATAGACAATC TTATAACGCA ATGATTACTG GTTATTCGCA GGAAGAACAT GGGTTCAAAG CTCTACTGTT GTTTCACCGG CTCATGTCAT CGGGTCTTGG TTTCGACGAG ATAAGTTTAT CAGGAGTATT CAGGGCTTGT GCCTTGGTGA AAGGACTTTC AGAGGGGCTT CAGATTTACG ATTTGGCAAT AAAAAGCAGC TTATCGCTGG ATGTTTGCGT TGCAAATGCT GCTATTGACA TGTATGGGAA ATGTCAAGCT CTGGCTGAAG CCTTTCGTGT ATTCGATGAG ATGAGAAGAC GTGATGCTGT GTCTTGGAAT GCGATTATAG CTGCACATGA GCAGAACGGA AAAGGATATG AAACGCTTTT TCTTTTTGTC TCGATGCTCC GTTCTAGGAT CGAACCTGAT GAGTTTACCT TTGGAAGCGT ATTGAAAGCT TGCACTGGTG GTTCTTTGGG TTACGGTATG GAGATCCATT CCAGCATTGT CAAATCAGGA ATGGCTTCAA ATTCCTCTGT CGGATGCTCT CTGATCGATA TGTATTCAAA GTGTGGAATG ATAGAAGAGG CGGAGAAGAT ACATAGTCGA TTCTTTCAAC GAACCAATGT CTCGGGAACA ATGGAAGAGC TTGAAAAGAT GCACAATAAG AGACTGCAGG AAATGTGTGT TTCATGGAAT TCAATCATTT CCGGATATGT AATGAAGGAA CAAAGCGAGG ATGCTCAGAT GCTTTTTACC CGGATGATGG AGATGGGTAT AACTCCTGAC AAATTTACTT ATGCAACAGT TCTTGATACC TGTGCGAATC TTGCTTCCGC TGGATTAGGT AAACAGATTC ATGCTCAGGT CATCAAGAAA GAATTGCAAT CTGATGTGTA TATCTCCAGC ACCCTGGTTG ACATGTACTC GAAATGTGGA GATCTCCATG ATTCAAGATT GATGTTTGAG AAGTCGCTGA GAAGAGATTT CGTGACCTGG AACGCCATGA TTTGCGGGTA TGCACATCAT GGGAAAGGAG AGGAAGCTAT ACAACTGTTT GAGAGAATGA TACTCGAAAA CATCAAACCG AATCACGTAA CTTTCATATC GATACTCCGA GCTTGTGCTC ACATGGGTCT GATCGACAAA GGACTCGAGT ACTTCTATAT GATGAAGAGA GACTATGGCC TGGATCCTCA GCTACCGCAT TACTCGAACA TGGTAGATAT ATTAGGAAAA TCCGGAAAAG TCAAGAGAGC ATTAGAGCTT ATTCGAGAGA TGCCATTTGA AGCAGACGAT GTCATATGGA GAACCCTGTT AGGAGTCTGC ACGATACATA GAAACAATGT AGAGGTTGCA GAAGAAGCAA CTGCTGCCCT GTTGAGATTG GATCCACAAG ACTCTTCAGC TTATACACTT TTATCAAATG TATACGCAGA TGCAGGAATG TGGGAAAAGG TTTCAGATTT GAGGAGAAAT ATGAGAGGCT TTAAGCTTAA GAAGGAGCCT GGTTGCAGTT GGGTTGAGCT AAAAGATGAG CTTCATGTGT TTCTCGTTGG AGATAAGGCT CATCCTAGAT GGGAAGAGAT TTACGAAGAG CTTGGTTTGA TTTACAGTGA AATGAAACCT TTTGATGATT CTTCTTTCGT GCCTGGGGTT GAGGTTGAAG AAGAGGACCA ATGGTGTTAC TGCTAAACAA TATTGTATTA AGTAAA
Length2626
Protein Sequence
Protein Residue
Map Locationscaffold_3: 530026.. 532777
Download Sequence
A.thaliana
AGI-codeAT3G02330.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.5357 Ahg496221 Anion-transporting ATPase
14.4568 Ahg340454 P-loop containing nucleoside triphosphate hydrolases superfamily protein
16 Ahg911676 Galactose oxidase/kelch repeat superfamily protein
21.8174 Ahg949105 Glutathione S-transferase family protein
23.2379 Ahg932388 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase
23.3452 Ahg489562 Trypsin family protein with PDZ domain
28.0357 Ahg888441 disease resistance protein (TIR-NBS-LRR class), putative
34.641 Ahg920552 Tetratricopeptide repeat (TPR)-like superfamily protein
35.8887 Ahg482724 Tetratricopeptide repeat (TPR)-like superfamily protein
37.3363 Ahg477959 ARM repeat superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression