Detail



ID : Ahg342316

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|342316|fgenesh1_pg.C_scaffold_3002079
Sequence
ATGGAAGATA ACTCGCCGGA GACGTCGGAA AAATTAATCA GCTCCTTCAT TGAGGTCACA TCTTCTTCTA GAGAAGTAGC TATATCTTTT CTTGAAACTC ATCAATGGAA TCTCAATGCT GCTATTTCGA CCTTCACTAA GAACGATGTC ACCGTCGCCG CCGAGCCAAA TGTTCCAAAC CCTAAAGACG AACAACTTCT CCGACGTAAT AGAAGTCCGT TTCCGAATCT TCGAGTCCGT ATCCCTAATT CATCTTTTTC TGCGTTTGAT GGCTCTTCCG GTTACTCTCC GTCGCGGTTA CAGTTACGAC CACCGTTTCC GTCGTATCCT TCTAGTGGTC AATTCTATCG TCTTCACTCA AAACGTGCAG CAGCTAATCC ATTTTCGAGG CATACGATTA AACGCCGTCA AGGCGATGGA AATGTCCGTA TCGATGATTT CTCCGGTGGA ACTGGTAGCG ATTCCGATGA AGCTCTGGAG AATTACGGCG GAGAAGATAA TAGAGCTATA GAAAGAACTG AGCAATCATC TGGAGAAACT GATTCACCTG AGCTTGAAGA AGAGCTTGAA GGAGTCTTTA CGTACACTGT AACAAGCTGG AGCAACGGTT TCACTGTCGA TGATAGTTCG TTAAAGACGT TGGATGATCC GGAAAATGCA TATTTTCTGG AGATCATATC GAAGATGGAG TCCCCGCGTG AACTCGCTCA AGTCCGTGTT CAAGTCAAAA TCATTAGGCG TGAAGAAGAA AACTTCACTG AAGCACAAGC CGGATCAGAC TCTGCCTCAA CTGAGCCACC AGCTTTAGCT GCCTCACTAT CAATGAGCTT TAGTGGGAAC CATGGAAAGC TAAAAGATGT CGATGCGATT TTCGACAGAG CTAAGGAGTC AGCTATAGAA AGATTTGAGC AATCATCAAA GGTAATGTCT GGAGAAACTG ATTCAGCTGA GCTTCAAGAA CAACAGCAAG AAGACCAGCC ATATAAAGTA GTCACGTCCA CTGTAACTAT TTGGAGGAAT GGTTTTACTA TCGATGATGA TCCGTTTAAG AGTTTGGATG ACCCGGAAAA TGCAGCCTTT CTTGAGAGGA TAACAAGTTT GGAGTCCCCA CGACTACTTG ATCCACTTAG TGTTCAAGTC AAACTCATCA GGCGTGAAGG AAACTTCAGT GAATCACCTT CATTCCACGG TGTCGGAAGA ACTCTAGCCG AATCAGACTC TGTCTCTACC GAGCTACCAA CTTTAGCCAC CTCACCGCCA CCATCAATGG GCTTAATAGT GGTAGATCCT ACAGCGCCAA CAACCTCGAT TCAGCTCAGA TTAGCAGACG GCACACGCCT AGTCACCCGT TTCAACACTC ACCACACCAT TAGAGACATT CGAGGCTTCA TAGACGCGTC TAGACCAGAC GGCTCCAAAG ACTACGAATT ACTCATCATG GGGTCTCCTC CTACACGACT GCCTGACTTT GACCAAACCA TAGAGAAAGC TGGCATCGCC AACTCTGTCC TCGTCCAAAA ATTCTAG 
Length1527
Protein Sequence
Protein Residue
Map Locationscaffold_3: 9042278.. 9044534
Download Sequence
A.thaliana
AGI-codeAT3G21660.1
DescriptionUBX domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
39.7744 Ahg944327 zinc finger (C2H2 type) family protein
51.672 Ahg907331 Mannose-binding lectin superfamily protein
55.3173 Ahg478226
57.4108 Ahg354612 gibberellin 3-oxidase 3
70.852 Ahg948551
72.6636 Ahg330931 Terpenoid cyclases/Protein prenyltransferases superfamily protein
79.404 Ahg916018 beta-galactosidase 14
93.4452 Ahg916132 Riboflavin synthase-like superfamily protein
94.9526 Ahg494865 Pectin lyase-like superfamily protein
95.7027 Ahg947786
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression