Detail



ID : Ahg342406

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|342406|fgenesh1_pg.C_scaffold_3002169
Sequence
ATGGCAATAA CCAACAAATT AATCATAACA CTTCTCCTCC TTATCTCCAT AGCTTTCGTC CACTGCTTGG CCTTCCATGT GGATATCGAA AAGTTCGAGC CACCGCAGCA AGAAGAACAA GAAGGTCCCG GCCGCCGTCC TGGCGGTGGC TCCGGTGAGG GATGGGAGGA AGAGTCGACG AATCACCCGT ACCACTTCAG GAAGCGGAGT TTCAAGAACT GGTTCCAGTC AAAGGAAGGT TTTGTGAAAT TGTTGCCCAA GTTCACAAAA CGTGCACCAG CTCTCTTCCG CGGAATTGAG AACTACAGAT TCTCATTGGT GGAGATGGAG CCAACAACTT TCTTTGTGCC TCACCATTGG GATGCTGATT CCGTGGTTAT AGTCCTACAA GGTAAAGGAG TGATCGAGTT TGTGACGGAT AACACAAAGG AAGCCTTTCA TATAAACAAA GGTGATGTGG TGAGAGTCCC TTCCGGCGTC ACCCACTTCC TCACCAACAC TAACCAAACC GTTCCTCTCC GCCTCGCCAA GTTCATAGTC CCCGTCAACA ATCCTGGCCA GTTTAAGGAT TACTTCCCTT CTCCATCGCA ATTTCAGCAA TCCTACTTCA GTGGGTTAAG CAAAGAAGTC CTCTCTACCA GTTTCAACGT ACCGGAAGAA TTGCTAGAGA GATTGGTTAC AAGATCGAAA GAAAGGGGTC AAGGGATTAT CCGAAGAATT TCTCCAGACC AAATCAAGGA ACTTGCCGAA CACGCTACAT CTCCTTCAAA CAAACACAAA GCTAAAAAAG AAAAGGAGGA AGACAAAGAC TTGAGGACGA TGTGGACTCC TTTCAATCTC TTTGCAATAG ATCCAATCTA CTCCAACGAC TTTGGTCATT TCCACGAGGC ACATCCTAAG AGTTTTGATC AACTCCAAGA CCTTCACATA GCCACCGCTT GGGCTAGCAT GAGACAGGGA TCCTTGTTCC TTCCTCATTT TAACTCTAAG ACCACGTTTG TAACGTTTGT GGAGAATGGT TGTGCCCGCT TCGAGATGGC TACTCCTTAT AAATCCCAAG AAGAGCAACA ACAATGGCCA GGACAAGGAC AAGAACAAGA AGAAGAAGAT CTAAGTGAAG ATGTACACAA AGTTGTATCA CGAGTGTGTA AAGGCGAAGT TTTTATCGTT CCGGCAGGTC ATCCATTCAC TATACTCTCG CAAGATCAAG ACTTTGTCGC GGTAGGGTTT GGTATTTATG CGACCAACAA CAAACGAACG TTCCTTGCAG GGGAAGAGAA TATGCTGAGC AACCTCAACC CCGCGGCGAC TAGGGTAACC TTCGGTGTTG GAAGTAAATT GGCGGAGAAA CTGTTCACGA GCCAAAACTA TTCCTACTTT GCGCCTACGA GCCGTAGCCA ACAACAAATT CCAGAGAAAC ACAAGCCATC GTTTCAATCA ATCTTAGACT TTGCCGGTTT TTGA 
Length1464
Protein Sequence
Protein Residue
Map Locationscaffold_3: 9528927.. 9530832
Download Sequence
A.thaliana
AGI-codeAT3G22640.1
Descriptioncupin family protein
TAIR curator summary
Alias[PAP85]
Gene coexpression
MR
MR Locus Description
18.3848 Ahg487178 SGNH hydrolase-type esterase superfamily protein
19.3907 Ahg933736 Domain of unknown function (DUF313)
21.0238 Ahg487525 nodulin MtN21 /EamA-like transporter family protein
23.1301 Ahg338279 desulfo-glucosinolate sulfotransferase 18
30.8383 Ahg944913 Putative membrane lipoprotein
31.0483 Ahg493352 HXXXD-type acyl-transferase family protein
32.0468 Ahg943172
43.6807 Ahg489266 Leucine-rich repeat protein kinase family protein
48.2804 Ahg930873 general control non-repressible 4
58.0172 Ahg905835 F-box and associated interaction domains-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression