Detail



ID : Ahg344647

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|344647|fgenesh1_pg.C_scaffold_4000989
Sequence
ATGATGCTAC TATTTAAACC GTCTTCAACT CTAGGAAGAA GGTTAAAACC ACGTCCATAC CAAAGCTTCT CTGAGTCTCT TCTAATGGAT AGTATTGAAG CAGCTGAAAC TCTCACACGT AAATGGATAT CTCCCAATCT ATCTAGTTCA TCTTCTTGCT CCCTCTCCTC GATTTTCTCC ACCGAAAATC GCGTAGAAGG ACGACGATTC ATCGAGGTTA TCAACAGCTT ACAATACGCG ATTCAAGGAG TGGTCTTGGT GAATCCTGAA TCACCAAAAC TCACTCGAGC CCATAATCTT GTAACAATCG CTATGAAACA GTTGGAAAAG GAGTTTTACC GGATTTTAAA ATCGAATCGA CGGAATCTTG ATCCCGAATC CGTTCGATCT TCCCCATCTT TCAATGCAAG GAATAAAGTG TCGATTTATT CCCAAGTTCC TAAATCTGAA GAAGCTGATG TTATGACGGA TTTGAAAATG ATCTCTGATT GTATGATATC ATCGGGTTAC GAAAACGAAT GTATCAAGAT TTACAAGAAG ATAAGAGGAT CAATTATGGT TGAAGCATTG AGTAACTTAG GGTTTGAGAA TCTAAGTTTT GGAAAGATTC AAAAATTGGA TTGGGATAGT ATGGAGAAGA ACATCAAGAA ATGGTTAGAA GCTACGAAAG TCCTTATCGC GAATTTGTTC GAGGGAGAAA GAATCCTTTG CGATCACGTT TTCTCGCCGT CTGTTTCCGT AGCCGAGTCT TGCTTCACGG AGATTACGTT AGATAGTGCT TTAACTCTCT TTATCTTCCC AGTGAGTGTT GCAAGATGTA AAAAAACCGT CGAGAAAATC TTCCTTACTC TCGATATTTA CCAAACGATA TCGCAGCTTA TGCCCCAAAT TGAAGAGATT TTCAGTTATG ATTCGACTTC TGCAGTTCGA TTACAAGCCG CTGATTCTCT TAAGAATCTT GGTGAAGAGA TTAATTCAAT GGTGGCTGAA TTCGAAGCTT CGATTACGAA AGAATCTTCG AAATCTCCAA TCCCTGGAGG CGGAGTTCAT CAGCTCACAA GGTACGTAAT GAATTTCATC GTTTTCCTCG CGGATTACCA TGAATGTCTA GCTGGAGTTC TAACTGAATC GACGTTGCCA TTACCGGAAG ATTACTTTGG GAACAATGAC GAAGATAACA AGGACGGAGA AACCAGATCT TCATCTTCTT CTACGGTAAC CACAAGAATT GCATGGCTAA TCCTCGTATT GCTCTGTAAA ATCGATACGA AATCTCGAAT GTACAACGAC ATGGCTCTTT CATATCTCTT CCTAGCCAAC AATCTGCATT ACGTGATCTC CAAGGTACGT ACATCGAATC TGAGGGTTGT GCTTGGCGAC GAATGGGTAA CGAATCACGA AGGGAAAGTT ACTCAATACC TCGAAAAATA CGAGAAAATC GCTTGGGGAG AAGTGATTAT GTCGCTTTCC GATTCAAACG AAGAAATGCT CAAAGAAAAC GTGGCGAAAG AGCGGTTAAA GCGGTTCAAC GACGCGTTCG AGGAAGCGTT TCAGAAACAG AGCGAATGGG TAGCACCGGA TTCGAAACTA AGAAACGATT TAAAAGATTC CGTGACGAAG AAGTTAACGT CTGTCGCGAC GTCGTTTTAT GCAAAGTACC ACGTCGAAAA TTGGGAGGAA GTCAGATTTG CCCCTGAAGA TTTGGGTAAT TACCTCTCTG ACCTTTTCTT AGGTACGGGA CGGTCGTGTA TTATTGTTCC TTCGCTTAAA CCATCGGACT CGGGACGTTC ACTCAAAAAT TCAGAATCAG GACGTTGA 
Length1818
Protein Sequence
Protein Residue
Map Locationscaffold_4: 12276218.. 12278131
Download Sequence
A.thaliana
AGI-codeAT2G28640.1
Descriptionexocyst subunit exo70 family protein H5
TAIR curator summaryA member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
Alias[ATEXO70H5][EXO70H5][exocyst subunit exo70 family protein H5]
Gene coexpression
MR
MR Locus Description
10.3441 Ahg924238
36.3868 Ahg313754 beta-galactosidase 15
38.1576 Ahg931240
58.8133 Ahg930033 Integrase-type DNA-binding superfamily protein
78.0769 Ahg352619
81.4371 Ahg949403 glycine-rich protein
86.0814 Ahg473024 Integrase-type DNA-binding superfamily protein
89.7329 Ahg936884
97.1339 Ahg323341 F-box and associated interaction domains-containing protein
98.5495 Ahg943636
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression