Detail



ID : Ahg350216

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|350216|fgenesh1_pg.C_scaffold_6000809
Sequence
ATGGCGGATA ATCCGGTGGA GAAAAAGTCG CGTTGTCGGT TTTTGGGATT TGTGTTTAAT AGACGTGGCT TGTGGTCCAA GAAATGTCCC GCAGACAATA GTAGCCATAA AAGCACAATG AGTAGCAGCA ATGCTTCCAC CGCCACCGCT ACCACCGCTA ACATTCAGTT CACCAAATCT CCATGTACTG AATTTAACCC GAGGAAGCTT CAAGAAAATA AAGTTTTACC TGAGCCGGTA GAGATCCAGA ACCAGGTACA GAGACCTATT TCAAAACCCT CATCGCATCA ATACCCAAAT AACCATCAAT TAGGCAGTAA TGGGAATAAC CAACCAAGTA GTAATCAAGG ACCAGTCCAA CAACAACAAG CGAGGAAGGT TCCAAGGGAA GCAATTGGTT TATCAGGTGA GCTAGAGAGC ATGATCATGG ATAATCAGAA AGCAAAAGGG AATAATTGCT CTATGGTTCG AGCTTCTTCA AGCAATGTGA TGTTGTTTGG CAATCTTGGG AACTTGAAGC AGCCCGGAGC ATCAGGTGGG AATCAAACTA CTATCCAGAA CAATGGATAC GGGAATACCG GTGGAGGGTA TGGAGTGAAG AAGACGATGG AAGAGGAAAG AAAAACATCG GTTACACCAA TACCGGCTTC AAATAATCAA GATCAGTCAG GATCTTTGTG TAGGGCGATT TCCACACGAA TGGACCCCGA AACGTTAAAG ATAATGGGTA ATGAAGATTA TAAGAACGGG AATTTCGCAG AGGCGTTAGC CTTGTATGAA GCCGCAATAT CCATCGATCC AAAAAAGGCT TCTTATCGAA GCAACAAGAG CGCAGCTTTA ACGGCATTGG GGAGAATTCT CGAGGCAGTA TTTGAGTGTA GAGAAGCAAT CAGAATCGAT CCTCATTACC ATAGAGCACA CCATCGGTTG GCTAACTTGT ACCTCAGGTT AGGAGAGGTG GAGAAGTCAA TATATCATTT CAAGCATGCA GGTCCAGAAG CTGACCAAGA AGACATTTCA AAAGCTAAAA TGGTTCAAAC ACATCTCAAC AAATGTACCG AGGCCAAAAG ATTGCGAGAT TGGAACACTT TGATCAAAGA AACAGAAAAC ACCATAACTA CAGGCGCTGA TGCAGCTCCT CAAGTATATG CATTGCAAGC AGAGGCCTTT TTGAAGACAT ACAGACATCA AGAGGCCGAC GATGCTTTGT CGAGATGCCC GGTTTTCGAT GGGGAAATGA GCACAAAATA CTACGGACCC ATCGGTTACG CCGGTTTCTT GGTCATCTGG GCTCAGGTTC ACATGGCTTC CGGCAGGTTT GTAGAGGCAG TTGAGGCGAT TCAACGAGCG GGCAAGCTGG ACGGTAACAA CAGGGAAGTG AGTATGGTTC TCAGGCGTGC GCAGGCGGTT ACAGCAGCGC GATCACGAGG GAACGAGTTC TTTAAAGCCA GACGATTTCA AGAAGCTTGT GCAGCTTATG GTGAAGGCTT AGACCACGAC TCAAGAAACT CAGTCTTGCT ATGTAACCGA GCGGCTTGCC TATCCAAAAT AGGCCAGTTC GATAGAGCCG TTGAGGATAC CTCCGCGGCA CTTGCAGTCC GTCCTAGCTA CACCAAGGCT CGACTCAGAA GAGCCGATTG TAACGCTAAG CTTGGGAATT GGGAATCGGC GATTGGAGAT TACGAGATAT TGAAAAAAGA GACACCGGAA GATGAGGAAG TGACCAGAGG ATTGTCGGAG GCTCAGAAGC AGCTCGTGAA ACGCCGTGGC CATGACTCTT GA 
Length1782
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3833512.. 3835570
Download Sequence
A.thaliana
AGI-codeAT5G10090.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias[TPR13][tetratricopeptide repeat 13]
Gene coexpression
MR
MR Locus Description
14.9332 Ahg486927 cation exchanger 4
17.6635 Ahg354612 gibberellin 3-oxidase 3
24.6577 Ahg487525 nodulin MtN21 /EamA-like transporter family protein
25.8457 Ahg323966
37.3497 Ahg943128
51.8652 Ahg916557
52.915 Ahg949154
53.1413 Ahg484455 AP2/B3-like transcriptional factor family protein
53.9166 Ahg355911 Galactose oxidase/kelch repeat superfamily protein
55 Ahg470978 plant glycogenin-like starch initiation protein 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression