Detail



ID : Ahg470473

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470473|fgenesh2_kg.1__427__AT1G04880.1
Sequence
AGAAACCAAA GCTTTCATTT TTATGAATAT TCAAGGGTAA ATGGTTAGCA AAGGAATGGC ATCAAGCTCT TGTCTCAAGC AAGGGTCAGT GCCAATGAAC AATGTTTGTG TTACCCCTGA AGCAACGTAT GAGGCTGTGG TTGCAGACCC TAGGCTTTTC ATGTCTTCCT TGGAAAGGCT GCACTCTCTC TTGGGTACTA AATTCATGGT TCCAATCATA GGAGGAAGAG ATTTGGACTT GCACAAGCTT TTCGTTGAGG TAACCTCTCG TGGTGGAATC AATAAGATAC TTAATGAAAG GAGATGGAAA GAAGTAACTG CTACATTTGT CTTTCCTCCA ACGGCAACAA ACGCATCGTA TGTTTTGCGC AAATACTACT TCTCGCTGCT GAACAATTAT GAGCAAATCT ATTTCTTCAG ATCCAGTGGC CAGATTCCTC CAGACTCTCT ACAGATCCCA TCTGCTAGAC CAGGCCTTAT GCACGGAGCC ATTAGACCTT CACAAGAACT TCAAGCTCTA ACCTTTACCC CACAGCCCAA GATCAATTCT GAAGAGTTCC CCGGAGGACC TGTTGCTGGA TCAAATGTGA TTGGAGTGAT CGATGGAAAA TTCGAAAGTG GTTACCTTGT AACTGTAACA ATTGGATCAG AGCAGCTTAA AGGAGTTCTG TTTCAGCTTC TTCCTCAGAA CACAGTTGCT CATCAAACTC CGCAACAGAG TCATGGTGTC GTCCCCAACA CTTGGAACAA TTCTGCCAAT CCCCAGGGGG TTATGGGAGG AGTAACAAAA CGCCGTAGGA GAAGAAAGAA ATCAGAGATT AAAAGACGTG ATCCTAATCA TCCAAAACCC AACAGAAGTG GTTATAACTT CTTTTTCGCA GAGCAGCACG CGAGGCTGAA ACCGCTTCAT CCTGGTAAGG ATAGGGATAT CAGCAGGATA ATTGGTGAGC TATGGAACAA GCTGAATGAA GATGAAAAAT TGGTTTACCA AGGGAAGGCA ATAGAGGACA AAGAGCGATA CAGAACTGAA ATGGAAGATT ACAGAGAGAA GCAAAGGACT GGACAGCTCA TAAGCAACGC TGTTCCGCTG CAACAGAGAC TTCCGGAGCA AAACGTAGAC ATGGCTGAAG CTGATCTTCC AATAGACGAA GTCGAAGAAG ATGAGGAAGA AGGTGATTCA AGTGGTTCCT CAGGCGAAAG CGAGCCACGT GATGATCAGA GCATAGAAAC TGATCCTGAA TTGGAAGAGC CATCTCCGAA TCCCTCAGGT CCAAACCTAA ACCCTAATCC GACTGAGATA GTGATGGCTC CTAAGGATAA TAACGGCGAT GTTGTGATGG AAACATCTCC ACTGAAGAAA GCCGATGAGC CGACTGTGGC GGTGACTGCT GAGCAGAACT GAAGATTCTT CTCTTATTTC TTATTCGAGT TGCCAGTTTT CGTGTTCCAT AGGTAAAGGT TAGAGAGAGG ATAGGGCTTC AGATACCTTA CTTTTGGCAC AAGATTATGC CTTTTTGGT 
Length1519
Protein Sequence
Protein Residue
Map Locationscaffold_1: 1566414.. 1569588
Download Sequence
A.thaliana
AGI-codeAT1G04880.1
DescriptionHMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
21.0713 Ahg316947 Pectin lyase-like superfamily protein
31.273 Ahg890287 Protein of unknown function (DUF1264)
39.4208 Ahg472269 laccase 8
40.5586 Ahg927040
46.8615 Ahg949069 transposable element gene
50.1996 Ahg906766
55.857 Ahg493352 HXXXD-type acyl-transferase family protein
55.8838 Ahg337685 histone acetyltransferase of the CBP family 4
56.5155 Ahg893637 Protein prenylyltransferase superfamily protein
61.8061 Ahg471935 MADS-box transcription factor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression