Detail



ID : Ahg470925

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470925|fgenesh2_kg.1__879__AT1G08610.1
Sequence
ATGGCTTCTT CGAATTTGCT ACTTGAGGTT CATTTCTTGC ATCTTCCAAG TTTGTCTCCA AAGCAGGTGA ATCCTTTATC TTGCAGAAAG TTTTCTTCTT TAGATTGGAA ACAAGAAATT GGGTTGAAAA ATTTGAGATG CCACGGCTTG ATGACTAGTG TGTGCATTGA CAATGTAGCT GATGTTGATG ATCATGCTGA GAGAGGCTCA GAATTCCATC ACTATGGTGT CGGTAATAAC TTGAGAGCCA GGAAGCAATT AGGTTTATCA TCTGATGGAC CAATTACCGA GAACGACGAA GAGACAAACA ATGAGATCCT TCATAACCTG TGCAGCAACG GCAAGTTAAC AGATGCGTGT AAACTAGTCG AGGTTATGGC ACGTCATAAT CAGGTTCCTC ATTTTCCTTC TTGCTCAAAC TTAGTCCGTG GTTTGGCCAG AATTGATCAA CTGGATAAAG CAATGGTTAT CTTGAGGATA ATGGTAATGT CTGGTGGGGT TCCAGATACT ATTACCTATA ACATGATCAT CGGAAATCTT TGCAAGAAAG GGCATATAAG ATCTGCATTG GTCCTCTTAG AAGACATGAG TTTGAGTGGG AGCCCTCCAG ATGTGATCAC GTATAATACA GTCATTCGGT GTATGTTTGA TCATGGGAAT GCTGAGCAAG CCATCAGGTT TTGGAAGGAT CAACTGCAGA ATGGTTGCCC TCCATATATG ATTACATACA CGGTTTTGGT CGAACTTGTG TGCAGGTACT GTGGAAGCGC TCGAGCTATG GAAGTTTTAG AAGACATGGC AGTGGAAGGT TGTTATCCTG ACATTGTCAC ATATAATTCT CTGGTAAACT ATAACTGCAG GCGAGGGAAT TTGGAAGAGG TGGCTTTGGT CATTCAACAT ATCTTATCTC ATGGATTGGA ACTGAACACT GTAACTTACA ACACTCTTCT ACATTCCCTT TGTTCAAACG AGTACTGGGA TGAAGTGGAG GAGATTCTAC ACATCATGTA CCAGACGTCA TACTGTCCAA CAGTTATTAC TTACAACATC CTGATCAATG GTTTATGCAA AGCCAGGCTT TTGAGTCGTG CAATCGATTT CTTCTACCAA ATGCTGGAAC AAAAGTGTTT GCCTGATATT GTTACTTACA ACACACTTCT AGGAGCCATG TCCAAGGAGG GAATGGTAGA TGATGCGATT GAGTTGCTTG GATTGCTGAA AAGCACGAGT TGTCTGCCTG GATTGATCAC TTACAACTCT GTAATCGATG GATTGGCCAG AAAGGGCCTG ATGAAGAAAG CATTGGAGCT GTACCATCGT ATGCTGGATG CTGGAATCTC TCCTGATGAT ATAACCCGCC GATCTTTAAT ATATGGTTTC TGCCGGGCAA ACCTAGTTGA AGAAGCTAGC CAAGTTTTAA AAGAGACGAG CAATAGAGGG AATGGGATCA GAGGTAGCAC TTACAGGTTG GTGATCCAAG GGCTATGCAA GAAGAAAGAG ATGGAAATGG CGATAGAGGT TGTTGAGATA ATGCTGACAA GTGGATGCAA GCCAGATGAG ACAATATACA CCGCAATAGT TAAAGGCGTG GAAGAGATGG GAATGGGAAG CGAGGCTGTG GAGTTGCAGA AGAAGCTGAC GCAATGGAAA CTCTTGAGAG AAGTGTAG 
Length1668
Protein Sequence
Protein Residue
Map Locationscaffold_1: 3087151.. 3088845
Download Sequence
A.thaliana
AGI-codeAT1G08610.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3 Ahg494231
13.6382 Ahg912397 PIN domain-like family protein
20.4939 Ahg920821 NAP1-related protein 2
22.2486 Ahg354097
32.9848 Ahg928973 PSF2
34.9857 Ahg339169 Tetratricopeptide repeat (TPR)-like superfamily protein
37.8418 Ahg492148 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
40.1871 Ahg907402
42.638 Ahg479673 transducin family protein / WD-40 repeat family protein
43.2435 Ahg906059 Transducin/WD40 repeat-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression