Detail



ID : Ahg937812

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937812|scaffold_502003.1
Sequence
TGTAACGATG AAAGAGAAGA AGATGATAAA GAAGAAGCTA AAGCCGTCGG TTACGCAGCA ATCGATCCTA ATTTCGTCAC TTCCCGATGA TTTGATATTG AGTTGTGTGG CACGGGTCTC AAGATTGTAC TATCCGACTC TCTCTCTCGT CTCCAAGAGC TTTCGATCAC TCCTGGCTTC ACCGGAGCTT TACAAGGCTA GATCACTCTT GGGACGCACG GAGAGTTGTC TCTATGTTTG CTTAAGGTTG ACACCTTTTA AAAGCAATAG CTGGTTCACC CTCTGCCGGA AACCTCATCA AACCCTAACC AGTAAGAAGA AAAAGAAGTC AAGTGGGTAT GTTTTGGCAA CAGTCCCAAT CCCCCATTCT CCTCGTGCGC ACTTGTCAGG TCTCGTGGCT GTTGGTTCTG ATATCTACAA CATTGGCGGA TGCAGAAAAA TCTACGAAAC GCCGCCCTCC TCTAGCGTCT GGATTCTGGA TTGCATGTCT CACACATGGC GCGAGGCTCC AAGCTTGCCG GTGGAGCCAA TGAGACTTTC TGCTAGCGTC CTTGATGGAA AGATATATGT AGCAGGAAGT AAAGAGTCCT TGGAGAACTT GTTTGAGGTG TTTGACACAA AAACACAAAC TTGGGATCCT GAGTCGTCTA TCCCTTGCAG CAAGACAAAA GGCATCTTTT TATGGTCCAA AAGCACATGT ATTGACGGAA AGCTCCACGT GGTGGCTGAC AGGCATGGTG TGGTGAGTCC CATGGGTGCT GTGATTGCTT ACAATTGCAA GGAAGGTAGA TGGGACATGG TTGAACAAAA CATGGAATGT TTTAAGTTTT CCAGTTCTCA TTGCGAGATA GACAACGTCT TGTACTGTGT TCTTCACGGA GCGATAAAAT GGTATGACAC TAAGGTAAGA TTGTGGAGCA GGTTGAAGGG TTTGGTAAAG CTACCTAAGT TCTCTCATGA TGCTTGTATT AAATTGGCTG ATTATGGTGG AAAGATAGCG GTTCTATGGG TCGATGAATC ATCTTATAGT GGCGGCAAGA AGAATAAGAT TTGGTGTGCG GAGATTGCGC TTGAAAGACG ACAAAATTGT GAAATTTGGG GAGAAGTTGA GTGGTTTGGT CATGTGCTTA CCGTACCTTC AACATGCGTT TTAGAGAAAG TTCTTGCTGT TACTGTTTGA TCATGAATGA ATGTGTCACA 
Length1200
Protein Sequence
Protein Residue
Map Locationscaffold_5: 13979750.. 13980945
Download Sequence
A.thaliana
AGI-codeAT5G51250.1
DescriptionGalactose oxidase/kelch repeat superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
16.7929 Ahg471835 organic cation/carnitine transporter 3
23.8328 Ahg931060
24.1868 Ahg318936 Domain of unknown function (DUF26)
41.6653 Ahg495243 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
46.7974 Ahg338146 KNOX/ELK homeobox transcription factor
48.3735 Ahg943128
49.8397 Ahg312221 Pectin lyase-like superfamily protein
52.7636 Ahg910864 transposable element gene
53.7029 Ahg892385 Protein of unknown function (DUF810)
62.45 Ahg311505 YUCCA 9
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression