Detail



ID : Ahg472599

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472599|fgenesh2_kg.1__2553__AT1G23380.2
Sequence
GCGGTTTCAT ATTATTTTTC TTCATCGATT CTTGATTTTT CAGAAGACAA TTCAAGAAGA CGATTTAGAA GACGGAGGAG TTCGCACCGG AGATCTTATA CTAATGGATG GAATGTACAA TTTCCATTCG GCCGGTGATT ATTCAGATAA GTCGGTTCTG ATGATGTCAC CGGAGAGTCT CATGTTTCCT TCTGATTACC AAGCTTTACT ATGTTCCTCC GCCGGTGAAA ATCATGTCTC TGATGTTTTC GGATCCGACG AGCTACTCTC AGCAGCCGCC TCCGCTTTAT CTTCGGAGGC GGCTTCTATC GCTCCAGAGA TCCGAAGAAA TGATGATAAC GTTTCTTTAA GTGTCATCAA GACCAAAATC GCTTGTCATC CTTCGTATCC TCGCTTACTT CAGGCCTACA TCGATTGCCA AAAGAAACAG GTCGGAGCAC CACCGGAGAT AGCGTGTTTG CTGGAGGAGA TTCAACGGGA GAGTGATGTG TATAAGCAAG AAGTTGTTCC TTCGTATTGC TTTGGAGCTG ATCCTGAGCT TGATGAATTT ATGGAAACGT ACTGCGATAT ATTGGTGAAG TACAAATCGG ATCTAGCAAG ACCGTTTGAT GAGGCTACGT GTTTCTTGAA CAAGATTGAG ATGCAGCTAC GGAACCTATG TACTGGTGTC GAGTCTGCCA GAGGAGTTTC TGAGGATGGT GCAATATCAT CTGACGAGGA ACTGAGTGGA GGTGATCATG AATTAGCAGA AGATGGGAAA CAAAGATGCG AGGACCGTGA TCTCAAGGAT AGGTTGCTTC GCAAATTTGG AAGCCGTATA AGTTCTTTAA AGCTGGAGTT TTCAAAGAAG AAAAAGAAAG GAAAGCTACC TAGAGAAGCA AGACAAGCTC TTCTTGATTG GTGGAATCTC CATTATAAGT GGCCTTACCC TACTGAAGGT GATAAGATAG CTTTAGCTGA TGCAACGGGC TTAGACCAGA AACAAATCAA CAATTGGTTT ATAAACCAAA GGAAACGTCA TTGGAAACCA TCCGAGAATA TGCCTTTCGC TATGATGGAT GATTCTAGTG GATCATTCTT TACCGAGGAA TGAATTTATT TACCGTATTT ATTTAACGTT GATAAAAAAA AAGATGGATG TATAATTCTG CCTTGCTTTG CCGACAAAGA AGAAAAAAAG AAAGAGAGAG TGAAGCATGG GACGACACAT GAATGAATAT TACACTCACT CACATGTAGG AGAAGGAACA AGTCAAAATG CTTTGTAACT ATTATTATCG GTGAATAAAC ATAACTTCTT TGGTCT 
Length1306
Protein Sequence
Protein Residue
Map Locationscaffold_1: 9878512.. 9883745
Download Sequence
A.thaliana
AGI-codeAT1G23380.2
DescriptionKNOTTED1-like homeobox gene 6
TAIR curator summaryhomeodomain transcription factor KNAT6, belonging to class I of KN transcription factor family (which also includes KNAT1 and KNAT2). Expression is increased in as and bop1 leaf mutants.
Alias[KNAT6][KNAT6L][KNAT6S][KNOTTED1-like homeobox gene 6]
Gene coexpression
MR
MR Locus Description
33.1813 Ahg334132 Aluminium activated malate transporter family protein
44.3847 Ahg327005 Galactose oxidase/kelch repeat superfamily protein
70.4628 Ahg351608 Protein of Unknown Function (DUF239)
72.3326 Ahg484096 RING/FYVE/PHD zinc finger superfamily protein
89.6828 Ahg946730
95.184 Ahg358371 Pectin lyase-like superfamily protein
98.1428 Ahg358814 Acyl-CoA N-acyltransferases (NAT) superfamily protein
98.3107 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression