Detail



ID : Ahg494638

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494638|fgenesh2_kg.8__454__AT5G43710.1
Sequence
TGTTGAATCG TGATTGAAGG ACGAGCCACC GAGTGACACA GTTGAAATAA AACTCCTCGG ACAAGAGGAG ATCCAGAGTG ATGTCTGAGA AGATTCATTC AACACACAGA CACAACTCTC ACCAAAATAG TTTATTGATG GAATCAAATA TCAGGTGGCT TGTGTTTGCC ATCTTGATCT CTCTGACATT TTCAAGTTTT GTCCTTGACC ATGGAGCTCT CGCCGAAAGT GTTAAGCCTG ATGAAGCTAA ACAGCTTAGA GACGAGGTAC GTGGGATGTT TTATCATGCT TTTGATGGAT ATATGAACAA TGCGTTTCCG CTCGATGAAT TGAGACCATT ATCTTGCCAA GGAGAAGATA CTCTTGGAGG CTATGCGTTG ACCCTGATTG ACTCCTTGGA TACATTAGCT TTACTTGGTG ACCGAGAGCG CTTCACTTCT TCTGTTGAAT GGCTTGGTAA AAACCTTCAG TTTAATATAA ATAAAACAGT CTCTGTGTTC GAGACAACTA TCCGAGTCCT TGGGGGCTTA CTTTCTGCTC ATCTGATTGC AAGTGATTAT GCAACGGGCA TGAGAATTCC GTCTTACAAC AATGAATTAC TAGTTTTGGC TGAGGATTTG ACACGGAGAA TGCTTCCTGC ATTTGATACA CCGACTGGAA TCCCATTTGG ATCTGTGAAT TTGATGTACG GTGTTGACAA ACATGAAAGC AAGATAACAT CAACTGCGGG TGGTGGTACT TTGTCTTTAG AGTTTGGCGT GCTTAGTCGT TTAACAAATG ATCCTGTTTT CGAACAAGTT GCAAAGAATG CGGTGAGGGG ACTATGGGCA CGTCGTTCAA ATCTCGACTT GGTTGGTGCT CACATCAATG TCTTTACAGG TGAATGGACA CAGAAGGATG CTGGTATAGG AACAAGCATT GATTCCTTTT ATGAGTATCT CCTCAAGGCT TATATACTAT TTGGGGATGA GGAATATCTA TACATTTTTC AAGAAGCTTA TAGATCTGCA ATGCAGTACC TTCACAAGGA TCCTTGGTAT GTAGAAGTCA ATATGGATTC TGCAGCTATT GTCTGGCCAG TATTTAACAG CCTTCAAGCT TTCTGGCCAG GACTTCAGGT TTTAGCTGGA GATGTTGATC CGGCAATTAG AACTCACACT GCCTTCTTTA GCGTCTGGAA ACGATATGGT TTCACCCCTG AGGGTTTTAA TCTTGCTACA CTTAGTGTCC AGTATGGGCA AAAGAGTTAT CCCCTAAGGC CGGAACTAAT CGAGAGCACA TATTGGTTGT ACAAAGCTAC CAGAGATCCC AGGTATCTTG ATGCAGGACG TGACTTTGTG GCTAGTTTGC AATACGGGGC AAAATGTCCT TGCGGTTATT GTCACATCAC AGATGTAGAA CTTCATAAAC AAGAAGATCA CATGGAGAGC TTTTTCCTCG CAGAAACTGT AAAGTACTTA TGGCTACTCT TCGACTTAGC TGTTGACTCA GATAACCTCG TTGACAATGG CCCTTACAAG TATATCTTTA GCACGGAAGG TCATCTTTTA CCATTAACAC CGCAAATATC TCTAGCTCGG GAACGTTGCT CTTACTTTGG CGGATATTGT CCAAGCAATT CCACAAAACT GGAACAAGAA GTCCTTGAAG AAGAGAGTAA TAACGATGAT CGCAGTAACA GCTATCCTTA CCACGAATCT TTTCCAATTA CCGGTTTGAT AAAGGGTTTA TGCCCAGGAC TAACACATGC TCAGAAATAC GGTTTGTCTT ATGTTCTACC GGAGAAGACA GATCGTGAAG ATGTTGACGA AGCTAAACCG GTAGTTACTA GCAGTTCAAT TGTGCTGATC ACGGATCAAA GAGTGGGAAA GAAACCACAG GAAGAAGAAG GATTTACTTC TCAGTCTGAA CCAATAATGA CAATCTCTGG TGGTAGTAGC AACGACCAAA CAGGTCAAGA GTTAACCTTG TTAGAGTCAG AAACTGATGA TCAAAGATTA TACTCTTCTT AACTCTCTCA TTTATTTATA TGTTTCAAAA AGAAGATTAC AAAACCTTTA TTTAGGAATA TAGATTAATA TTCAGTTATA CAATCTCATC AAGAATCTTG AATCCGTCTT GTGTTGATCG ATTGTTG 
Length2137
Protein Sequence
Protein Residue
Map Locationscaffold_8: 3796874.. 3801268
Download Sequence
A.thaliana
AGI-codeAT5G43710.1
DescriptionGlycosyl hydrolase family 47 protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.58258 Ahg474468 Plant protein of unknown function (DUF641)
7.61577 Ahg486092 RNA-binding (RRM/RBD/RNP motifs) family protein
8.48528 Ahg477286 Major facilitator superfamily protein
8.7178 Ahg483745
13.8924 Ahg495592 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
14.0712 Ahg355491 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein
17.9165 Ahg483999
19.799 Ahg312926 cytomatrix protein-related
25.593 Ahg475066
25.9037 Ahg928711 tubulin folding cofactor B
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression