Detail



ID : Ahg476103

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476103|fgenesh2_kg.2__1233__AT1G69710.1
Sequence
ATGGCTGATT CCTCGAGAAT TAGTCTCTCT GAGAGAGACG TTGAACAGGC CATTACGTCG CTTAAGAAAG GGTCTTACTT GTTGAAATAT GGACGTAGAG GGAAGCCCAA GTTTTGTCCA TTCCAGCTAA CAAGTGACGA GTCTGCATTA GTATGGTACT CTGGCAAAGA AGAGAAGCAG ATTAAGCTGA GTCAAGTCCT GAGAATTGTT CCTGGACAAC GCACGTCTAC ATTTAAGAGA TATCCACGCC CCGAGAAAGA GTATCAGTCA TTTTCGCTCA TATGTCCTGA CAGGTCCTTG GATTTGATAT GTAAAGACAA AGATGAAGCA GAAGTTTGGG TTGTTGGTTT GAAGTCATTG ATTACTCGGG TAAAAGTCTC CAAATGGAAA AACACTATTA AACCTGAGAT CACTTCGGCG GAATGTCCAA CCCCTCATGC ACGAAGAGTG TCTCCATTTG TAACAATTCT TGATCAAGTT ATTCAACCCT CTAATGAGAC TTCTACACAA ACCCGGTTGG GGAAAGTGTT TTCTGACATT GTTTCAATAA CTGCACCCCC CAGTAACAAT AATCAAACAG AAACCAGTGC CAACCTTTTC TGTCCATTTT CTCCGACTCC GGTAAATGTT GAAAATTCAA GTTTACGATT CTCGACCAAT GACTCAATTC GGCTCAGTCT ATCTAGCGCT GTCAGCACCT CTAGCCATGG TTCATATCAC GAAGACTTTG ATGCCTTAGG TGATGTTTTT GTCTGGGGTG AATCTATATG TGATGGTGTA CTTACCGGCA CTGGGAATTC ATTGAACTCC ACGACAGAGG ATGCCCTTTT ACCAAAAGCA TTAGAATCAA CTATAGTACT TGATGCCCAA AACATTGCAT GTGGTAAATG TCATGCGGTT ATAGTTACCA AACAAGGAGA GATCTTCAGC TGGGGTGAGG GAAAAGGTGG AAAGCTAGGA CATGGCTTAG AAACAGACGT CCAACAACCA AAGTTCATTA GTAGTGTCAG AGGATTGGGT TTCAAATCTT TAGCCTGCGG AGATTTCCAT ACATGCGCTA TTACTCAATC TGGTGATCTT TACAGTTGGG GTGATGGCAC TCATAATGTC GATTTGCTTG GGCACGGGAA TGAATCCAGC TGCTGGATTC CCAAGAGAGT GACTGGTGCC TTACAGGGAC TGTATGTATC ATATGTCGCT TGCGGTCCCT GGCATACAGC AGTAGTTGCA TCATCAGGCC AGTTGTTCAC GTTTGGAGAT GGATCTTTTG GCGCTCTGGG TCATGGAGAC CGGAGAAGCA CAAGTGTTCC CCGTGAAGTT AAAATCCTAA GTGGACTAAT AGTAACGAAG GTTGCGTGTG GCGTTTGGCA TACAGCTGCA CTGGTAGAAG TGACAAATGA AGCATCTGAG GCAGAAGTTG GCTCTTCACG CGGGCAAGTC TTCACATGGG GGGATGGCGA GAAAGGCCAG CTTGGTCATG GTGACAATGA TGCACAACTA CTTCCCGAGT GTGTAATTTC ATTGTCGAAT GAAAATATCT GCCAAGTTGC CTGCGGACAT AGTCTCACGG TTTCTCTTAC ATCCACAGGA CATGTGTATA CAATGGGTAG CACGGCTTAT GGACAGCTTG GTAATCCTAC CGCCAAGGGA AACTTTCCTG CACGTGTTGA AGGAGACATA GTAGAGGCTT CTGTGGAGGA GATTGCGTGT GGTTCTTATC ATGTTGCAGT TTTGACATCT AAATCAGAAA TTTACACATG GGGAAAGGGA TTAAATGGCC AGTTAGGCCA TGGAACCATT GAGAACAAAA GAGAACCTGC GGTTGTGGGT TTTCTGAAAG AAAAGCAAGT GAAGGCTATA ACATGTGGAT CAAACTTTAC TGCTGTGATT TGTGTTCACA AATGGGTACC TGGCTCTGAA CATTCTCTAT GTGCTGGTTG CCGCAATCCC TTCAACTTTA GAAGAAAACG CCACAACTGT TACAACTGTG GTCTGGTATT TTGTAAAGTA TGCAGCAGTA GGAAGTCTCT GAGAGCTGCT CTGGCACCTG ATATGAACAA ACCATATCGA GTGTGTTACG GATGTTTTAC CAAGCTGAAA AAGTCGAGAG AATCATCTCC TTCTACGCCA ACTTCACGGG CCAGAAAACT TTTGAACATG CGGAAATCGA CAGATGTTTC AGAAAGAGAC AGCTTAACTC AAAAGTTCCT CTCAGCGCAT GCCAGAATAT CGTCTGCTGA CTCTTTATTG CATTACGGTG AAAGAAGGCA CCACAGACGA GACTTAAAAC CGGAAGTAAA TAACAGTAAT GTCTTCCCTT CCATGAATGG CAGTTTACAG CTTGTTGGTT CGCCATTATC CAAAGGATCA ACAGCTTTGC CTAAAATTCC CAAGAATATG ATGGTTAAAA TTCCTGGTTC AGGAATGAGC TCTCGCACAA CATCCCCAGT TTCAGTAAAG TCAACTAGTC CACGTCGATC TTATGAAGTA GCAGCTGCGG AATCTAAACA AATAAAAGAC AGTTTTAGTC AAGATATGTC GGGTCTAAAG GAACAGGTAG AACAACTTAC TTCCAAAACT CACCAACTTG AAGAGGAACT CGAAAAAACC AAAAGGCAGT TAAAAGTAGT CACTGCAATG GCAGCAGATG AAGCAGAAGA AAATAGATCT GCAAAGGAGG TTATTAGATC TCTCACCACT CAGTTGAAGG AAATGGCTGA AAGACAATCT CAAAAGGATG CTATTAGCAC CAACTCAAAG CGCACAGACA AAGAGACATC AGAGATAACT CAGACTAGTA ACCAAACACA TATAAGAAGC ATGGTTTCTC ATGATAGTCA ACATGAGAAC AATCTAACAA GTAGGAGCTT CGCTAATGGG CATAGGAAAC AGAATGAGAA ACCAGAAAGG GTTGTGCAAG ACGAACCAGG AGTGTATTTA ACATTGTTGG CTTTACCTGG TGGTGGTACT GAACTCAAGC GTGTCCGGTT CAGCCGGAAA CAATTTACCG AAGAACAAGC GGAGAAGTGG TGGGGTGAAA ATGGAGCTAA AGTGTGTGAG CGCCACAACA TTCTAGTTTC TTAGGACTCC TGTCTTCTCC AATAGAGAAT AAAAATAGAG AAACACATGG ATGCAGATTT TATTTGTTTT GGAACATGAT GTTTTTCTGC TGTTCATAGA AAAAAATGTT TGTTGTAAAT TATATATTTA ATTC 
Length3214
Protein Sequence
Protein Residue
Map Locationscaffold_2: 13091440.. 13095738
Download Sequence
A.thaliana
AGI-codeAT1G69710.1
DescriptionRegulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
16.2481 Ahg888609 thymidylate synthase 2
20.9762 Ahg333399 Mitochondrial glycoprotein family protein
27.4226 Ahg472917 AAA-type ATPase family protein
30.0333 Ahg495654 RNA-binding (RRM/RBD/RNP motifs) family protein
35.242 Ahg944232 long-chain base1
38.1445 Ahg477703 endoribonucleases
38.8844 Ahg497270 global transcription factor group E7
41.8927 Ahg491444 Protein kinase superfamily protein
46.2817 Ahg491310 CBS domain-containing protein with a domain of unknown function (DUF21)
47.9375 Ahg496442 Galactosyltransferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression