Detail



ID : Ahg888609

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|888609|Al_scaffold_0007_595
Sequence
ATGAGGTGTT TGCAAAACTC CGCAAAGATT CTACCTTTAG CGTTTAAATC GGCTTTGTTA CCTTTGTCTC AAAGGTGGTT CTGTAAATTT TCTCCTAAGC CATCCTCTTT GGCAAACATC TTCAAGGTTT CAGTTTCAAC CATGGCCAAC ACTCTCAATG GAAATGTGAT CATGCCTTCA AAACCTCAGA GTACTTACCA AGTTGTGGTA GCTGCAACCA AGGAAATGGG TATTGGTAAA GACGGAAAAC TTCCATGGAA TTTGCCTACC GATCTCAAGT TCTTCAAGGA TTTAACTTTG ACCACTTCGG ATTCTGCTAA GAAGAACGCT GTTGTAATGG GTAGGAAAAC GTGGGAGTCT ATTCCCACAA AGTATAGGCC ACTCTCTGGT CGCCTGAATG TTGTCTTGAC TCGTTCAAGC GGTGTCGATA TAGCCAACAC TGAGAATGTT GTAACTTGCA GTAGCATAGA TTCTGCTCTG GACTTATTAG CTGCACCTCC GTTTAGTCTG TCCATTGAGA AGGTGTTTGT AATAGGAGGT GGCGACATAT TGAGGGAAGC GTTGAATGGA CCGAGCTGTG AAGCCATCCA CTTAACGGAG ATTGATACAA GTATTGACTG TGATACATTT ATTCCCGCGG TTGACACATC TGCATATCAG CCTTGGTGTT CGTCATTTCC AATATGTGAA AATGGACTTC GATTTTCCTT CACGACTTAT GTTCGTGTAA AGAGTTCTTC TGCCTGTGAA TCCTCTGATG TGAGTGATGG GTCAAAGGTC CTTCAAGTTG ATTGGAAAAA GTTTTCTTCT TTTCTTCCTA AGATGATTTT TGACCGTCAT GAAGAATTTC TATACTTGAA TCTGGTCAAA GAGATAATCT CAAATGGAAA CTTAAAGGGC GATAGGACAG GGACTGGTAC ATTATCTAAA TTTGGTTGTC AGATGAAATT CAATTTACGC AGGAATTTCC CACTTCTGAC GACAAAGAGA GTTTTCTGGA GAGGTGTTGT TGAGGAACTT CTATGGTTCA TAAGCGGTTC AACCAATGCA AAGGTACTTC AAGAAAAGGG TATCCGTATA TGGGATGGGA ATGCGTCGAG AGCATATCTT GATGGTATTG GACTGACTGA GAGAGAAGAA GGTGACCTTG GACCCGTTTA TGGATTTCAG TGGAGACACT TTGGTGCTAA GTACACAGAT ATGCATGCTG ATTATACGGG GCAAGGATTT GATCAGCTCT TAGATGTAAT TCACAAGATC AAGAACAATC CTGATGATCG ACGGATTATA ATGTCGGCTT GGAATCCTTC TGATCTTAAG CTGATGGCAC TTCCTCCATG CCACATGTTT GCACAGTTTT ATGTTGCAGA TGGAGAACTG TCATGTCAAA TGTATCAGCG CTCAGCCGAT ATGGGTCTCG GAGTACCATT TAACATTGCA TCATACTCCC TTCTTACATG CATTCTCGCT CACGTCTGTG ATCTTGTTCC TGGTGATTTT ATCCATGTGA TTGGAGATGC TCATGTTTAC AAAAACCATG TCAGGCCTCT GCAAGAGCAA CTTCAGAACC CACCAAAACC TTTTCCTGTT TTGAAGATAA AACCGGAGAA GAAAGATATA GATTCTTTTG TGTCGGATGA CTTCGAGCTC ATTGGCTATG ATCCTCACAA GAAAATAGAT ATGAAAATGG CGGTTTAG 
Length1698
Protein Sequence
Protein Residue
Map Locationscaffold_7: 2550660.. 2553406
Download Sequence
A.thaliana
AGI-codeAT4G34570.1
Descriptionthymidylate synthase 2
TAIR curator summaryEncodes a bifunctional dihydrofolate reductase - thymidylate synthase gene. This is unique in Arabidopsis and protozoa. Other organisms have independent genes for this function.
Alias[THY-2][thymidylate synthase 2]
Gene coexpression
MR
MR Locus Description
16.2481 Ahg476103 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
22.7156 Ahg495104 Pentatricopeptide repeat (PPR-like) superfamily protein
27.9285 Ahg477906 peroxiredoxin IIF
29.4958 Ahg932772 haloacid dehalogenase-like hydrolase family protein
34.7131 Ahg943542 Protein kinase superfamily protein
41.6173 Ahg480484 tRNA/rRNA methyltransferase (SpoU) family protein
44.6318 Ahg924866
45.8258 Ahg903991 Glycosyl hydrolase family 85
45.9783 Ahg481427 ATP-dependent protease La (LON) domain protein
48.7134 Ahg931123 Polymerase/histidinol phosphatase-like
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression