Detail



ID : Ahg476238

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476238|fgenesh2_kg.2__1368__AT1G71060.1
Sequence
ATGGTCTTCT CTCGATTCTT CAGCTCCGCC GGAGTGAATC TCTCTCGCCG TGTCTACTTA AGAATCTCTT CTTCTTCGTC CTCAAGCTTG AGTCTCGAAT CGATTCCATG GATTCATAAA GCTTCAAATT TTACAGTTTA TGGATCATTT CACGCTTCTT CTGTTGAAAC CCAAGTTTCT GCTAATGATG TTTCACAAGA CGCTGATAAA ATCTGCAATA TTCTGTCCAA ATTTACAGAT TCAAAGGTTG AAACTTTGCT GAACGAAGCT TCTGTTAAAC TCTCGCCGGT ACTAATCGAA GAAGTACTGA AGAAGCTAAG CAACGCTGGG GTTTTAGCTT TATCTGTATT CAAATGGGCA GAGAATCAAA AGGGTTTCAA GCACACTACT TCAAACTACA ACGCATTGAT CGAATCATTA GGTAAGATCA AGCAATTCAA ACTCATTTGG AATCTTGTAG ACGACATGAA ACAAAAGAAG CTTTTGAGCA AAGACACGTT TGCTCTCATT TCTAGACGTT ACGCTAGAGC TAGGAAGGTT AAAGAAGCTA TAGCTGCGTT TCATAAGATG GAAGATTATG GGTTTAAGAT GGAATCAAGT GATTTCAATC GTATGCTTGA TACTTTGAGC AAATCTAGAA ATGTTGGAGA TGCACAGAAG GTGTTCGATA AAATGAAAAA GAAAAGGTTT GAGCCTGATA TTAAGTCTTA TACTATTTTA CTTGAAGGTT GGGGTCAGGA GTTGAATCTT TTGAGAGTTA ATGAGGTTTA TAGAGAGATG AAAGACGAAG GTTTTGAACC GGATGTGGTT GCGTACGGTA TCATTATCAA TGCGCATTGC AAGGCGAAAA AGTATGATGA AGCTGTTAGA TTCTTCAATG AGATGGAACA GAGGAATTGT AAGCCGAGTC CTCACATTTT CTGTAGTCTG ATTAATGGAC TGGGCTCTGA GAAGAAGCTG AATGATGCTC TTGAATTCTT CGAGAGATCA AAGAGTTCCG GGTTTCCTCT TGAAGCTCCT ACTTACAATG CACTAGTAGG AGCTTATTGC TGGTCACAGC GAATAGAAGA CGCATTTAAA ACCGTGGATG AGATGAGATC GAAAGGGATT GGCCCAAATG CTAGAACTTA TGATATAATT CTTCATCATT TGATTAGAAT GCAGCGCACA AAAGAAGCCT ATGAAGTTTA TCAGAAGATG AGTTGTGAAC CGACGGTGAG TACTTACGAG ATCATGGTGA GGATGTTTTG CAACAAAGAG AGATTGGATA TGGCGATCAA GATTTGGGAC GAGATGAAAG GAGAAGGTGT TCTTCCGGGA ATGCACATGT TCTCAAGTTT GATCACAGCT CTGTGCCATG AGAACAAATT AGACGAAGCT TGTGAGTATT TCAATGAAAT GTTGGATGTG GGTATTAGGC CACCGGGACA AATGTTTAGC CGTCTTAAAC AAACGCTTCT CGATGAAGGC CGGAAAGATA AAGTAGCGGA TTTAGCTGTG AAGATGGATA GGCTGAGGAA AACCCAACTT GTTGGCTGA 
Length1539
Protein Sequence
Protein Residue
Map Locationscaffold_2: 13906052.. 13907590
Download Sequence
A.thaliana
AGI-codeAT1G71060.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.89898 Ahg489560 RECQ helicase SIM
19.4936 Ahg897788 Metal-dependent protein hydrolase
22.5832 Ahg934309 Pentatricopeptide repeat (PPR) superfamily protein
34.4238 Ahg948545
34.5832 Ahg926580 RING/U-box protein with domain of unknown function (DUF 1232)
57.0526 Ahg925788 Pentatricopeptide repeat (PPR) superfamily protein
58.6003 Ahg487450 DNAJ heat shock N-terminal domain-containing protein
83.0783 Ahg927726 cell division protein ftsH, putative
87.0574 Ahg470075
91.2085 Ahg497391 Protein of unknown function (DUF1313)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression