Detail



ID : Ahg477479

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477479|fgenesh2_kg.3__180__AT3G02460.1
Sequence
CTAAAACTTT ATGAATCATA AATTCATAAT CGTCGTGATA AAGCCTCTTA TTACCCAAAA TCGTACTCAA TTTTTTTTTA AAAAATAAAA TCTTTTAGTT CTCACCAAAC TTAGCAAGTT GGCATAACCA TATTTTAATC AAATAATATT CTCGACGTCG TCGTTTCGTG CTGGCTTCAC TTGAATTATT ATTATTTTTC TGGCTGGACT CATATTAAAA AAAAAAACAT CACTTTCTTC AAGCGGATGA AAAATTCAAA GATTGAGTCA CCACCACCAT AATAACATAC GCGTTTGAGT TCCCAGATGT GATCTCCATC CAACGTTGTA TTTCTTTCGC TTTGGTTATC TTCTTCAATT CCATCGAATT CCAACAATTC TCATCGAGGA ATTTTGTTTC GAATCTTTTG ATCTGACTAA ACGTAGGCAG CTTGATCAAA AGGAGACTGA AACCAATGCT AGGAGGAGTC TCTTCAGGTT AGTAGAGAAT GAGTAGAAAA AGAACCGAAA ATGGCAGTGA ATCAGCACCA GTCACTTCTC ATGTTCCCGT GGATAGATTC GGGTTTCTCA AGCAAGAACA TGGCAATTCT TCGCCTGAGC GTTTTAGCAA GTCTAGAACT ACATCATCCA CTGACCATGA CAGAGAGGAG AGAAAGGTGA GAAAATGGAG GAAGATGATT GGGGTTGGAG GTAGTGATTG GAAGCATTAT GTTAGGAGAA AACCTAATGT TGTCCGAAGG CGTATACGAA AAGGGATCCC TGATTGCTTA AGAGGTCTTG TTTGGCAGTT AATCTCAGGA AGTCGGGACC TTTTGCTTAT GAATCCTGGT GTTTATGAGC AATTGGTGAT TTATGAAACA TCGGCATCAG AGCTTGATAT CATTCGAGAC ATATCCCGTA CTTTCCCATC ACATGTTTTC TTTCAGAAGA GACATGGACC CGGGCAAAGA TCGTTGTACA ATGTCCTTAA GGCGTACTCA GTTTATGACA GAGATGTTGG ATATGTTCAG GGGATGGGGT TTATAGCGGG TTTGTTGCTT CTGTATATGA GCGAAGAAGA TGCGTTCTGG TTATTAGTTG CATTACTAAA AGGAGCTGTT CATGCTCCAA TGGAAGGATT GTATCACGCA GGGCTTCCTC TTGTACAGCA ATACCTGTTT CAGTTAGAAA GCTTGGTAAA AGAGCTAATT CCGAAGCTCG GAGAACATTT TACTCAAGAA ATGATTACTC CAAGTATGTA TGCAAGTCAA TGGTTCATCA CCGTCTTCTC TTATTCATTT CCTTTCCCTT TGGCTCTACG GATATGGGAT GTGTTTCTCT CTGAGGGTGT TAAAATCGTG TTCAAAGTGA GCTTAGCATT GCTGAAGTAT TGCCAAGATG AGTTGGTAAA ATTACCGTTT GAGAAACTAA TACATGCTCT GAAAACTTTC CCGGAAGACG CAATGAATCC GGATACCTTG CTTCCATTGG CTTACCCTAT CAAGGTATCA AAGCGTTTGG AAGAACTGAA ACTGGAGTAT GAGAAGAATA ATGCCAAACC GGTTCAACCG TAGGAATGGA AAACTGGTTG GCAATAACCA GAAGCAGAAG TTGGATTCGA ATTCGTTTGT CATCCTTATC TTTTCTTGTT GGAATATATT CTTTTTTCAT CATATTTGTC AAGTTGGGTG GGAATTTCTG ATCAGAAGCT CTCTCATTCT TTTTAGCAAT TTCGTGGAAA TGAA 
Length1724
Protein Sequence
Protein Residue
Map Locationscaffold_3: 567805.. 576780
Download Sequence
A.thaliana
AGI-codeAT3G02460.1
DescriptionYpt/Rab-GAP domain of gyp1p superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.43398 Ahg482101 Integrin-linked protein kinase family
25.0599 Ahg486058 Ca-2+ dependent nuclease
32.7261 Ahg486948 carboxyl-terminal domain (ctd) phosphatase-like 2
32.8634 Ahg484840 FAD/NAD(P)-binding oxidoreductase family protein
35.9166 Ahg488294 Transducin/WD40 repeat-like superfamily protein
36.6606 Ahg481811 Protein kinase superfamily protein
37.8946 Ahg952033 Cyclase family protein
38.4708 Ahg311800 Neutral/alkaline non-lysosomal ceramidase
41.9643 Ahg490677 Papain family cysteine protease
48.9081 Ahg493373 SET domain protein 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression