Detail



ID : Ahg890636

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|890636|Al_scaffold_0007_2622
Sequence
ATGAAGTTGA GATCGGATTC ACGATCTACT TCGTTTTCTT CTCTCCTATT CGTCGTCTTT CTCTCGGTTC TAAGCGGACT CGTTTCTCGT ACCGAGTCGG CTCAGCAACC TTTCCGCCGC GAGCCAGGTC ATCCTCACTG GCATCACAGC GCTTTCCTCG ACGTACGAGA GAGTGTTCGA TCCGATGTCC GCCGTATGCT TCACTCCCGT GCCGAGGTAC CATTTCAGGT TCCTTTGGAA GTGAATATAG TGCTTGTAGG TCTGAATGGA GATGGAGGTT ACAGGTATTC CGTGGATCCT CAAAAATTAG AGGAGTTCTT AAGAGCTAGT TTCTCAACAC ATAGGCCTTC ATGCCAAGAG ACAGGGGAGC CACTTGATAT CGAGCATCGA GTTGTTTATA ATATCTTTCC TAGTGGGCAA CCTGAATTAA TAGCTCTGGA GAAGGCAGTG AAAGAAGCCA TGGTGCCTGC TGGAACTGCA CTAGAGGTTG CTACTGATTT TGGAAGACAC TTACCTGCCT TTGACGTAGA GGCAACAAAA GTTGAGTCCG CATTTAACCA GCTTTACTCG TATATATTTG ATATTGATGT GGGAGCTGGA TCAGCAGCCA CGGCGGATAA ACCTATACCA AGTGCCATAT TTGTTGTGAA TTTTGATAAG GTAAGAATGG ATCCTCGAAA TACAGAGATT GATCTAGACA GCTTGATGTT TGCAAAGCTA CCAGAGCTTA GTGATGTAGA CAAGGAGAAA CAAGAGGCAG ATTACATTTA TCGATATAGA TACAATGGTG GAGGAGCATC CCAAGTTTGG CTTGGATCAG GCAGATATGT TGTCATAGAT TTGTCTGCGG GGCCTTGTAC ATATGGGAAG ATTGAAACTG AAGAGGGAAG TGTTAGTCCC AGAACAGTGC CAAGGATACG AAACATAGTG CTTCCAGGAA ATGTTAGTCC TGTTGGTCAT CAGTCTACCC ATGATATATT TTCTGGTCAG TTAGCAGCGT TAGTAGCTAC TACAATTGAG CATGTCATAG CTCCTGATGT CAGGTTTGAG ACGGTTGATC TAGCAACTAG GGTGCTGGTA CCTATCATTG TGCTCCAAAA CCACAATCGA TATAATATCA TGGAAAGAGG ACAAAACTAC AGCATAAATA TTGAAGAGAT AGAATCCGAG GTAAAGAAAA TGATTCATCA TGGGCAAGAA GTAGTGATCG TTGGAGGGGC TCATCCATTA CATCGTCATG AGAAATTAGC TATTGCTGTC TCAAAAGCCA TGCGTGGGCA TTCCCTTCAA GAAACTAAGA AGGACGGAAG ATTTCATGTG CATACCAAAA CATACCTAGA TGGTGCTATC CTCAAAGAAG AGATGGAAAG GTCTACTGAT GTTCTCGCTG CTGGTTTGCT CGACGTGTCT GACCCTGGGC TTTCTAATAA ATATTTTCTC CGCCAGAGCT GGGATGACGA ATCTGAAGGT TCAGGTGATT CCATAGTAAA GCACAGGCCT CTCTGGTCAT CTTATAGCTC AAAACTTCAG AAGGGAAAGA AAAAGAACGT CGTTAAGAAA AAAGGCGACC TCTACCGCAC TTATGGAACA AGAGTTATTC CAGTGTTTAT ACTCTCATTA GCCGATGTGG ATCCAATGCT CATGATGGAA GATGAGAGCC TCGTGTGGGC GACCAGTGAT GTTGTCATTG TGCTTCAGCA TCTAAACGAG AAAATACCTT TGAGTTATGT TTCTGAAACA GAGAGACAAC ATGCTGTCCC ATCACAGGTA CAGCGACATA TACTTGCAGG TATAGCTTCT GCTTTAGGCG GTGTAAGTGC ACCATATGAA AAGACCTCTC ACGCGCATGA AAGACCTATC ACGAATTGGC TTTGGGCAGC CGGTTGTCAC CCGTTTGGAC CATTCTCAAA CGTCTCTCTA ATCAGTCAAA TGCTTCAAGA TGTTGCACTG AGGAATACTA TTTATGCACG GGTTGATTCT GCTCTACGCA AAATCCGTGA AACATCAGAG GCAGTACAAA ACTTTGCATC TGAATACCTC AAGACTCCAC TAGGCGAGCC AGTGAAAGAT AAAAAGAACA AAACCAAAAC AGAGCTATGG GTGGAGAAGT TCTACAAAAA GACAACCACA TTGCCTGAGC CTTTCCCACA CGAGCTAGTC GAAAGATTAG AGAAATATCT AGACACTGTA GAAGAACAAT TAGTGGATCT ATCTTCTTTG CTATACGACC ACAAGCTATA CGATGCTCAT CTTAACAGCT CAGAGATTCT TCAGACCACC ATGTTTACAC AACAGTACGT AGAACATGTA CTGGAAACAG AAAGAGAGAA CATGAGATGT TGTAAGATAG AGTACAAATA CACAGTTGGA GTCAAGTCTT ACCAAACGTT GGTGTACGGA GGAATACTTG TAGCTGGTTT TCTCGTTTAT TTCCTTGTCA TTTTCTTTTC TTCTCCTCCT TCTCGCTAA 
Length2469
Protein Sequence
Protein Residue
Map Locationscaffold_7: 11468149.. 11473055
Download Sequence
A.thaliana
AGI-codeAT4G16180.2
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.4641 Ahg482523 ARM repeat superfamily protein
4.24264 Ahg487684
5.47723 Ahg496629 splicing factor, putative
7.07107 Ahg478494 Tetratricopeptide repeat (TPR)-like superfamily protein
9.43398 Ahg472338 squamosa promoter binding protein-like 14
9.53939 Ahg488158 no exine formation 1
10.8167 Ahg482185 hydroxyproline-rich glycoprotein family protein
10.9087 Ahg928022 CLP-similar protein 3
12.9615 Ahg471128 endoplasmic reticulum-type calcium-transporting ATPase 3
13.7113 Ahg491970 AFG1-like ATPase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression