Detail



ID : Ahg479028

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479028|fgenesh2_kg.3__1729__AT3G15720.1
Sequence
AAAGCCTTAG CTTCAACAAC ATTTTTTCTT TTAGTTGTAA ACATATTCAT GATTTGACTC TTTTTCTCCA AAATATATGA AGAAGAAGAC CTGGTTCTTG AATTTCTCAC TGTTCATTCT CCAAATCTTC ACATTTTCAA ATGCATTGGA TGTTACTCAA TTAGGAGCGA TTGGTGATGG AGTTACAGAC GATTCGCAGG CGTTCTTGAA AGCTTGGGAA GCTGTCTGTA GCGGAACAGG AGATGGGCAG CTTGTCGTTC CGGCAGGGAT GACATTTCTG TTACAGCCCC TGAAGTTTCA AGGTTCTTGC AAATCGGCCC CAATTTTTGT TCAGATATTA GGCAATCTGG TTGCATCGAG TAAAGGAAAT TGGAAAGGAG ACAAAGATCA ATGGATTCTT TTTACAGACA TTGAAGGACT TGTGATTGAA GGTGGCGGTG AAATCAATGG CCAGGGTTCG AGTTGGTGGG AACACAAAGG CTCAAGACCT ACCGCGTTGA AGTTCAAGAG CTGCAACAAC CTTAGATTGA GTGGGTTAAC GCATGTAGAT AGTCCAATGG CTCACATTCA CATAAACGAT TGCAACTATG TGACCATCTC AAGTCTACGG ATAAATGCGC CGGAATCAAG TCCTAATACT GATGGAATCG ACGTAGGCTC TTCATCCAAC GTTGTCATCC AGGATTGCGT CATCGGAACC GGTGATGATT GCATTGCGAT TAATTCGGGG ACGTCTAACA TCCGGATTTC CGGTATAGAT TGCGGACCAG GCCATGGAAT AAGCATAGGA AGCTTGGGAA AAGATGGGGA GACAGCTACA GTGGAGAATG TATGTGTCCA AAACTGTAAC TTTAGAGGAA CTACTAATGG TGCTCGGATC AAAACCTGGC AGGGCGGATC GGGTTACGCG AGGATGATTA CCTTCAATGG AATTACTCTA GATAATGTTG AAAATCCAAT CATAATCGAT CAGCTCTATA ACGGTGGAGA TTCTGATAAA GCCAAAGATC ATAAGTCGTC GGCAGTGGAA GTGAGCAAAG TGGTGTATAG CAATTTCATT GGGACGTCGA AGTCAGAGTA CGGCGTTGAC TTCAGATGCA GCGAGACAGT ACCATGCACC GAGATTTTCT TGAGAGACGT GAAAATAGAA ACGGCATCAT CAGGATCAGG ACAAGTCGCA CAAGGACAGT GTTTAAACGT GAGAGGTGTG TCCACGCTTG CTGTACCAGG TCTAGAATGC TTAGCCCTTT CCACAGATAT GCTGTCATCG GCGCAATTGC CGGAACAAAC TTGCATGTTG GCACAGTCAG TGCAACCAAG AACAACACAA CCGATGCAAG ATCCAATATG GGATTTTGAA AGCAGAGGGA AACGACTTAG AGTTTACAAT GCCGTATTAG TTTCATTTGT CTCTTTGGTT ACGTATATTT TAGGTGATTA A 
Length1441
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6265075.. 6267246
Download Sequence
A.thaliana
AGI-codeAT3G15720.1
DescriptionPectin lyase-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12.0416 Ahg949262 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
19.2873 Ahg940520 AINTEGUMENTA-like 6
34.0588 Ahg486004 UDP-Glycosyltransferase superfamily protein
36.3868 Ahg939416 PATATIN-like protein 9
38.2623 Ahg910727 branched-chain amino acid transaminase 1
50.2792 Ahg492529 Disease resistance protein (TIR-NBS class)
50.6162 Ahg496879 Leucine-rich repeat protein kinase family protein
51.7301 Ahg494701 Leucine-rich repeat protein kinase family protein
52.0577 Ahg912808 Protein of unknown function, DUF642
53.8331 Ahg483351 TRICHOME BIREFRINGENCE-LIKE 39
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression