Detail


ID : Ahg479811

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479811|fgenesh2_kg.3__2512__AT3G23020.1
Sequence
ATGTTGTTGA ATCTTCGTTT AGATGGAAGT AGCTTACATG TTCTCTGTTC TACAAAAACC TTACCGATTT CGCCTCTCGA TAAATTCCCA TCCGTCAAGA AAGTGAAGCA GAATTACGTA CCAGGAACTC ACGACAGTGA CAAAGGACCA CAGAGAAGCA CCAGAAATGG CGACCGAGGT TGTGGTACTG TTGCTCATGA AGTTGTCGCC GGAAAAAACT TACTTTTTGT AAACCCAGGT AATGGCAGCG TCGGAAAATC AGGTTTTAGT TATGGGTTTG TTGATAGGAG AAGTAAAGAT GGCGGGTTTG GAGGGAATGG TATGGTTGGT AAAGTGCACA CCAAGTGTTC GACGAAACGT CTGAGTTACG GAGGATGTAT TCCCGCTATT CTAGAGGCTT TGGATTGTAT TGAGGATGTT GAAGATGCGT TGAGTCCTTG GGCAGAGAAG CTTAGTAACA AGGAGAGGAC GATTATTTTA AAGGAGCAGA CGCGGTGGGA GAGAGCGGTG GAGATTTTCG AGTGGTTTAA GAGTAAGGGT TGTTATGAAT TGAATGTGAT TCATTATAAT ATCATGCTTC GGATACTTGG GAAAGCTTGT AAATGGAGGT ATGTGCAGAG TTTGTGGGAT GAAATGATTA GGAAAGGTAT CAAGCCGATT AATTCGACGT ATGGGACTCT CATCGATGTT TATAGCAAAG GCGGGCTTAA AGTACATGCG CTTTGTTGGC TAGGGAAGAT GAGTAAGATT GGGATGCAGC CTGATGAAGT TACGACGGGG ATTGTTCTTC AAATGTATAA AAAGGCAAGA GAGTTTCAAA AAGCGGAGGA GTTTTTCAAG AAATGGTCGT GTGACGAAAA CAAGGCGGAT TCACATGTTT GCTTGAGCTC TTATACTTAC AACACGATGA TTGATACGTA TGGTAAGTCC GGTCAGATAA AAGAGGCTTC AGAGACGTTC AAGAGGATGC TAGAAGAAGG GATTGTTCCA ACCACAGTGA CTTTTAATAC CATGATTCAT GTTTATGGCA ATAATGGTCA GTTTGGTGAA GTCACTTCTT TGATGAAAAC AATGAAGTTT CATTGCGCAC CTGATACAAG AACATATAAC ATTCTGATTT CACTTCACAC GAAGAACAAC GATATAGAAA GGGCAGGGAC CTACTTCAAG GAAATGAAAG GCGCTGGGCT TAAACCGGAT CCTGTAAGTT ACCGCACTCT CCTCTATGCA TTCTCGATTA GACATATGGT TGAGGAAGCT GAAGAGCTTA TAGCAGAGAT GGATGATAAT GATGTTGAGA TTGATGAGTA TACACAATCT GCTCTCACTA GAATGTATAT AGAAGCAGAG ATGCTTGAGA AATCATGGTC ATGGTTCAAA AGGTTTCATG TTGCGGGTAA TATGAGTTCT GAAGGCTATT CAGCCAACAT TGATGCATAT GGTGAGCGTG GATATTTATC AGAAGCCGAG AGGGTATTTA TCTGCTGCCA AGAAGTAAAT AAGAGAACAG TTCTTGAGTA CAACGTAATG ATCAAAGCTT ATGGAATTAG TAAAAGCTGT GAAAAGGCGT GTGAGTTATT TGAGAGCATG ATGAGTTATG GGGTCACACC GGATAAGTGT ACATATAATA CTCTCGTCCA GATCCTTGCG AGCGCCGACA TGCCTGATAA AGCCAAATGC TACCTGGAAA AAATGAGAGA GACGGGATAT GTGAGCGATT GTATACCTTA CTGTGCTGTG ATTTCGAGCT TTGTGAAACT GGGTCAGCTC AATATGGCAG AGGAAGTGTA TAAAGAGATG GTTGAGTACA ATATCGAACC CGATGTTGTT GTATATGGCG TCTTGATCAA TGCTTTTGCG GATACTGGAA ACGTTCAGCA AGCTATGAGT TATGTAGAAG CGATGAAAGA AGCTGGAATT CCGGAAAACT CTGTTATATA CAATTCTCTG ATCAAGCTCT ACACTAAAGT CGGGTACTTA GATGAAGCTG AAGCAATATA CAGAAAGCTT CTTCGATCGT GTAACGAGAC ACAGTATCCG GATGTATATA CATCAAATTG TATGATCAAC CTGTATAGTC AAAGATCGAT GGTGAGAAAA GCGGAAGCTA TATTCGAAAG CATGAAACAG AGAAGAGAAG CAAACGAGTT TACCTTCGCG ATGATGTTAT GTATGTACAA GAAGAACGGT AGGTTTGAAG AAGCGACTCA GATAGCAAAA CAGATGAGAG AGATGAGGAT TCTAACTGAT CCGTTGAGTT ATAACAGCGT TCTCGGTTTA TATGCTTTAG ACGGAAGATT CAAAGAAGCT GTTGAGACAT TCAAAGAGAT GGTGTCATCT GGAATTCAAC CTGATGACTC AACGTTCAAA TCACTTGGAA CCATTTTGAT AAAACTTGGG ATGTCGAAAA AAGCTGTTCG TAAGATCGAA GAAATTAGGA AAAAAGAGAT TAAGCGAGGA TTAGAATTAT GGATCTCAAC TCTCTCATCT CTTGTTGGGA TTGAAGATTG CGAGGACGAG CTTTAG
Length2526
Protein Sequence
Protein Residue
Map Locationscaffold_3: 9770778.. 9773303
Download Sequence
A.thaliana
AGI-codeAT3G23020.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.6301 Ahg950165 Ribosomal protein L31
12.2474 Ahg492161 chloroplast sulfur E
15.6205 Ahg480706 Peptide methionine sulfoxide reductase family protein
16.0624 Ahg493412 Pentatricopeptide repeat (PPR) superfamily protein
18.868 Ahg471752 Tetratricopeptide repeat (TPR)-like superfamily protein
21.4476 Ahg897736 polynucleotide adenylyltransferase family protein / RNA recognition motif (RRM)-containing protein
23.5584 Ahg475311 DEA(D/H)-box RNA helicase family protein
25.923 Ahg935438 Pentatricopeptide repeat (PPR-like) superfamily protein
29.8998 Ahg340454 P-loop containing nucleoside triphosphate hydrolases superfamily protein
32.6803 Ahg353700 DNA topoisomerase, type IA, core
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression