Detail



ID : Ahg479935

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479935|fgenesh2_kg.3__2636__AT3G24000.1
Sequence
ATGGCCTTGC GTTTCCCGTC TCGTCTCCTC TCCCAGCTGA AGCTATCTCG GCGTCTACAT TCTCTTCCGG CACCGTTATC TGAAGATTCC GATGACGAAT CTTTAAAATT CCCATCCAAT GATCTCGAGG GCAGTTATAT TCCCGTCGAT AGACGTTTCT ACAACACGCT GTTGAAGAAA TGTACAGTCT TTAAATTACT CACTCAGGGA AGGATCGTTC ATGCTCATCT TATTCAATCT ATCTTTCGTT ATGATCTCGT TATGAACAAC ACTCTTCTCA ATATGTATGC GAAATGCGGA AGTTTGGAGG AAGCTCGTAA AGTGTTCGAC AAAATGCCTG AGAGAGATTT TGTTACTTGG ACTACTTTGA TTTCTGGTTA CTCGCAGCAT GATAGACCTT TTGATGCGTT AGTATTGTTT AATCAGATGC TGAGATTTGG ATTTAGTCCT AATGAGTTCA CTTTGTCTAG TGTGATCAAA GCTGCTGCTG CTGAGAGAAG GGGTTGTTGT GGTCATCAAC TTCATGGGTT TTGTGTTAAG TGTGGTTTTG ATTCGAATGT TCATGTTGGT AGTGCTCTTC TTGATTTGTA CACTCGCTAT GGTCTTATGG ATGATGCACA ATTGGTCTCT GATGCCCTTG AGAGCAGGAA TGATGTTTCT TGGAATGCTC TGATTGCTGG CCATGCTAGG AGGTGTGGTA CAGAGAAGGC TCTTGAGCTT TTTCAAGGGA TGCTTAGAGA GGGTTTTAGA CCTTCCCATT TCTCGTATGC TAGCCTCTTT GGTGCTTGTT CCAGTACTGG GTTCTTGGAG CAAGGGAAAT GGGTTCATGC GTATATGATT AAATCCGGTG AAAAGCTTGT GGCTTTTGCA GGAAACACTC TTCTTGACAT GTATGCGAAA TCAGGAAGCA TCCATGACGC GAGGAAAATA TTCGATAGAT TGGCTAAAAG GGATGTGGTG TCTTGGAACT CGCTGCTGAC TGCTTACGCC CAACATGGAT TTGGAAAAGA AGCAGTGTGC TGGTTCGAAG AAATGAGGAG GGGCGGGATT CGTCCCAATG AAATCTCGTT TCTCTCAGTG CTTACAGCTT GCAGCCATTC TGGTCTTCTT GATGAAGGAT GGCATTACTA TGAATTGATG AAGAAAGATG GGATAGTACT CGAGGCTTGG CACTACGTCA CGATCGTAGA TCTTCTTGGG CGAGCCGGTG ATCTTAATAG GGCACTGAGA TTCATCGAAG AAATGCCAAT AGAACCCACT GCAGCCATCT GGAAAGCTCT GCTTAATGCT TGTAGAATGC ATAAAAATAC GGAATTGGGA GCTTATGCCG CTGAGCATGT ATTTGAACTT GACCCAGACG ACCCTGGTCC CCATGTAATA CTATATAACA TCTATGCATC AGGTGGCAGA TGGAACGATG CTGCGAGAGT GAGAAAGAAG ATGAAGGAAA GTGGAGTGAA GAAGGAACCT GCTTGCAGTT GGGTAGAGAT TGAGAATGCA ATCCATATGT TTGTGGCAAA TGATGAACGT CATCCACAGA GGGAGGAGAT TGCTCGGAAG TGGGAAGAGG TTTTAGCAAA GATCAAGGAG TTGGGATATG TGCCCGACAC TAGCCATGTA ATAGTCCATG TGGATCAACA GGAGAGGGAA GTGAATTTAC AATATCATAG TGAGAAAATT GCTTTGGCAT TTGCGCTTCT CAACACCCCT CCTGGATCAA CCATACACAT CAAGAAAAAC ATCCGGGTTT GTGGGGATTG CCATTCAGCA ATCAAGTTGG CGTCAAAGGC GGTTGGGAGG GAAATCATTG TGAGAGATAC AAATCGGTTC CATCATTTTA AGGATGGTGC TTGTTCTTGC AAGGATTATT GGTAG 
Length1875
Protein Sequence
Protein Residue
Map Locationscaffold_3: 10759669.. 10761543
Download Sequence
A.thaliana
AGI-codeAT3G24000.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.583 Ahg358384 calnexin 1
32.311 Ahg951606 Lateral root primordium (LRP) protein-related
37.855 Ahg494464 RNAse THREE-like protein 3
43.8178 Ahg479998 proteolysis 1
54.4794 Ahg913843 signal recognition particle 19 kDa protein, putative / SRP19, putative
64.9923 Ahg482083 Protein of unknown function (DUF1685)
69.2098 Ahg491368 Tetratricopeptide repeat (TPR)-like superfamily protein
71.4353 Ahg477045
74.162 Ahg336756
76.7398 Ahg897711 SWIB complex BAF60b domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression