| Annotation |
|---|
| Description | jgi|Araly1|951606|scaffold_803493.1 |
| Sequence |
ATGGCTGGTG GTATCGGAAA ATGGCAGGAT TTTTCTCGCT AGGACAAGGC GGAGGAGGAA ACAGCCAAGA CGAGCACAAC CACCACAGAA CCAACACTAC TAATCCTTCT TCCTCGGGAA CAGAATCTTG GCTTTGGTGC AGAAACCCTA ACTCTAACGC TGACGGTGGA GAAGTTGCTC CTTCTTACAA AGGAACCCTT GAGCTATGGC AACATCCAAA CAATCAAGAA ATCATTTTCC AGCAGCAGCA GCAAGAAAGG CTCGATCTTT ACACTTCCGC TGCGGGTTTA GGTGTTGGAC CGAGCAACCG GAGCTTAATT GAAACTTCCG GCGGTGCGTT GATGATGATG AGGAGCAGTA GTGGCGGCGG CGGGCCAAGC TGCCAGGATT GTGGGAATCA ATCGAAGAAA GACTGCGCTC ACATGAGATG CAGGACTTGC TGCAAGAGCC GAGGCCTTGA GTGTCCCACT CACGTGAAGA GCACGTGGGT CCCTGCCGCT AAACGCCGAG AACGCCAGCA GCAGCTTGCT TCCGGTCAAC AACCGCAGTC GCAGCCGCAG GGTGAGAGCG TCCCTAAACG GCAGAGAGAG CATATCCAGG CGAGATCGAC TTCCCTGGTC TGCACTCGTA TACCGTCTAA CAACACTTCA GGGTTAGAGG TTGGGAACTT TCCGCCGGAA GTTCGGTCGC CGGCGGTTTT CCGGTGCGTG CGTGTGAGTT CCGTAGATGA TGAAGAAGAA GAGTATGCAT ACAAAACAGC TGTGAGTATA GGTGGTCACG TCTTCAAAGG TATTCTCTAC GATCAAGGCC CGGCCGAGAG AAGCTCCTCA GGCGGTGGAT CTCAGCCGTT GAATCTCATA ACCGCAGGCC CATCGGCCTC ATCATCAAGC CCAAACGTGA GCTGCAACAA TGGAGTCGTT GGCTCCACTT CAGATCATTA TATCGATCCT GCCTCACTTA GTTATCCTAC TCCCATCAAC ACTTTCATGA CTGGTACGCA TTTCTTCTCC AACTCAAGAT CTTGAATTCT ACACTGAGAG TACAA |
| Length | 1045 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 21417418.. 21418882 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G66350.1 |
| Description | Lateral root primordium (LRP) protein-related |
| TAIR curator summary | A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid. |
| Alias | [SHI][SHORT INTERNODES] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 23.5797 |
Ahg940092 | nuclear factor Y, subunit A10 |
| 29.5127 |
Ahg484945 | Dof-type zinc finger DNA-binding family protein |
| 32.311 |
Ahg479935 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 47.8121 |
Ahg496986 | Chalcone-flavanone isomerase family protein |
| 57.0526 |
Ahg331749 | |
| 59.925 |
Ahg470477 | sucrose phosphate synthase 3F |
| 60.2661 |
Ahg476492 | Auxin efflux carrier family protein |
| 79.95 |
Ahg895327 | cysteine-rich RLK (RECEPTOR-like protein kinase) 33 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
|
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| Growth Chamber expression |
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