| Annotation |
|---|
| Description | jgi|Araly1|480133|fgenesh2_kg.3__2834__AT2G05210.3 |
| Sequence |
GAAGAAGATG GCGAGGAAGA GAGACAGTCC CAAGCTTATC AAAATCAAAG ACGCCATTAA TCTCATCAAC CAACAAGTTA GTCTAATCGG TATCGTTCTT GAACAAAGAG AACCAAAACA ATGTCGCAAC AATGATTGGA TTTGTACGCT ACGGATAATT GATGATACGT ATCCAAGTCC TGGATTTACT GTGAATGTAT TTAGTAACAC TCTTGAAGAG CTTCCTCAAA TCAAGAACCA CGACGACATG ATTCTCTTTA CATGCATCAA GATGCAAACT TTTGATAGTG GAAAAAGAGT AAATGCTGCT TGTAATAAAA GGGTTTCTTC GTTTGCGCTG TTCGAAGGTG AGGATTTTGT TTGTTACCAA TGTACTTCGA ATTTTCATGA AGAAGAAGCA CTATACAAGA GTGCGATGGC TGATCTGCGC AAATTTTTTG CTAGTTGTAG CGAAGTTGTT AGAGCTTTGC AGAGTATATC TTACAGGACA GAACCCTGCT CTGTAGAAAC TTTTTCATTC TTGAGAGAGA TCAAGAAAGG AAAACGCTTT GATTTGGTGT GCAGGATTCT CCATGCCGAT GAAAATATGA GCGCCGTTTT TGTTTGGGAT GGAACTGATG CACCCCCAGC ATCTATTCTG GCAAAGAGAA GTGAAGAAGA CAAGGCATTT AGCAGTCTCT CTGTTCATAC TTTACTGTCA AGAGATATAT TGCTCAGCTT CCCAACTGTT GGAACGATCT TGAGAGTTTC TCTAAGCAGT CATCTATTTC ATCGGGTTAA ACCTGGTGAT TGGGTAGAAC TTTACCAGTT ACACTGTGAA GTTGATAAGG GATCTTGGGT AATCAAAGTT ACCAACTCTA CAAAGGTTCG TCATCTCGCT CAAGATGATT GTTTAGTTGA AAAGATCATG AGGCTATATA ATAAGAGAAT ATCATCAAAA TTGGGACACA TTCCGTTCTG GTGTTTTCCG TCACCTCCTG GATTAACAGA GACAGATGAG AATTGTGCCC CATTTGTTAC ACTTATGGAC ATCATAACAT TCCCCAAGGT TACATGCAAG TACAGATGCA TTGTTCGGGT TGTAACTGCA TATCCTTGGC AAGTAGATGA TTTTTGTTCA AATGAGAATC GCCATCACCG AGTTTTGTTG ACTCTTGAGG ATCCAACAGC GACTTTAGAG GCTTTCTTAT GCGATAAAGA TGCTGAGTAC TTTTGGGGTT TAGGGTTTCA GGACACAGAG ACATTGAGGA AGAAGCGGAA TTGGTTGCTC GGAATAAGGG AAAGCTTGAA CTTTGTGGCT CCAAGAAATC CACCATGGAT AGAGTGCTGC ATCCTCTCCT ACTATACTAA CAAAGCTGAC CCGTGGAAAA CCAGATTATA CAGAATCTTT GGTACTAGAC TACTTAACTA AGTAAAAAGT TTAGTATTAG GGCTTAGATC ATGTTAAGAA TGTTGGATGT TGCTGACTTT AGTATGGTAG TTGTGTTGTT TTATTTCATT AAGAACTTGT AACCAAACGA ACATCTTCAT GATATAAACC AAATCCAACA ACTGAATAC |
| Length | 1559 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 12932647.. 12935361 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G05210.1 |
| Description | Nucleic acid-binding, OB-fold-like protein |
| TAIR curator summary | Encodes AtPOT1a, an accessory factor for telomerase required for positive telomere length regulation. Note on nomenclature: different names have been given to Arabidopsis POT-like genes (Kuchar and Fajkus, 2004; Shakirov et al, 2005; Tani and Murata, 2005). According to a unifying nomenclature (Surovtseva et al, 2007), At2g05210 (previously named AtPOT1) is designated AtPOT1a, while At5g06310 (previously named AtPOT2) is designated AtPOT1b. |
| Alias | [ATPOT1][AtPOT1a][Protection of Telomeres 1a] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 10.4881 |
Ahg483344 | |
| 26.7208 |
Ahg476803 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 39.8748 |
Ahg900722 | RNApolymerase 14 kDa subunit |
| 39.975 |
Ahg484824 | dicer-like 3 |
| 47.5605 |
Ahg486380 | Protein kinase superfamily protein |
| 61.5792 |
Ahg474968 | E3 Ubiquitin ligase family protein |
| 62.2334 |
Ahg489556 | Protein of unknown function (DUF1624) |
| 62.6418 |
Ahg337736 | TPX2 (targeting protein for Xklp2) protein family |
| 67.1193 |
Ahg477113 | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
| 67.9706 |
Ahg472548 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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