Detail



ID : Ahg481021

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481021|fgenesh2_kg.4__81__AT2G21540.1
Sequence
TTCTTCTCCT TACAAAAATG GCTTCTTCTC TTTCTCTCTC TCTCTTACAA GTTACAATGT AAAGGTCAAA CCTTTTTCCA ATTAGAACCC TTTTATTGGA TTAAGCTAAA ACTCTCTCTC TCTCTCTCTC TTTGGATTTT CAAAACAAAG AAAGCTTAAA TCCAGACTAT AAAGCATGAC GGATACAATG TCTACTCATA TGGATCGACA TAATAAGCTA GATTATGATG GCTCGGAGGA TGAAAAGAAG ACAAAGCTTT GTTCCTTGAA GAAGAAAGCA ATCAATGCCT CCAACAAATT CAAACACTCT TTCACCAAGA GAACTCGAAG GAACAGCCGA GTCATGTCTG TCTCTATCGT TGACGACATT GATCTTGAAG AGCTTCAAGC TGTTGACGCT TTCCGTCAAG CTCTTATCTT GGACGAGCTC CTTCCTTCGA AACACGATGA TCATCACATG ATGCTTAGGT TTTTGAGGGC AAGGAAGTTT GATCTTGACA AAGCAAAGCA AATGTGGACT GATATGATCC ATTGGAGGAA AGAGTTTGGT GTTGACACAA TCATGGAGGA CTTTGATTTC AAGGAAATAG ACGAAGTCCT CAAGTACTAT CCTCAAGGTT ACCATGGTGT TGACAAAGAG GGAAGGCCTG TTTACATAGA GAGGCTAGGC CAAGTGGATG CCACAAAGCT GATGCAAGTC ACTACCATCG ATAGGTATGT CAAGTACCAT GTGAGAGAGT TTGAGAAGAC TTTCAATATC AAATTACCAG CTTGCTCCAT TGCTGCCAAG AAGCATATTG ATCAGAGCAC CACCATCTTG GATGTGCAAG GCGTGGGGTT GAAGAACTTC AGTAAGGCTG CAAGGGATCT TCTTCAGCGT ATCCAGAAGA TCGATAGCGA CAACTACCCT GAGACATTGA ACCGTATGTT CATTATCAAC GCTGGTTCTG GATTCAGGCT TCTGTGGAGC ACTGTGAAAT CTTTCCTTGA CCCAAAGACC ACCGCAAAGA TCCACGTTCT TGGCAACAAA TATCAAAGCA AGCTTCTTGA GATTATCGAC TCCAATGAAC TTCCTGAGTT CTTGGGTGGT AACTGCACTT GTGCAGACAA AGGTGGGTGT ATGCGTTCAG ACAAAGGTCC ATGGAACGAC CCTGACATCT TCAAGATGGT TCAAAACGGA GAAGGGAAGT GCCCAAGGAA GACATTGTCA AACATTGAAG AGAAGACAAT CTCAGTGGAC GAGAACACAA CAATGAAATG TGATTCCTTT GCGAAGAACA AATTCGATGC AGAGAACGCG AAATTCATAC CGATGATTGA CAAAACTGTG AATGCTACTA CTTGGCCTAC AAATCTCCAC AAGTCAAACT ATCCCGAACC TGAAGATTTA TACTCTGCCG TGAAGCCATC GCAGAGGAGA GGAGGAGAAG GATATTTATT CGGAGGCGTG ATGTCGTTGA TGATGGGGTT AATGACTGTG GTGAGGCTGA CGAAAAACAT GCCAAGGAAG CTCACTGAGG CCGCGATTTA CGGTGGCGAA GCGGAGAAAG CAGAGACTAC AATGGTGTCA AACCAAGAGT ATATGTCGAT GGTGAAGAGA ATGGCGGAGC TGGAGGAGAA ATGTAGGTCT TTGGACAATC AGCCGGCAGC GTTCTCGCCG GAGAAAGAAC AGATTCTCAC TGCTGCTCTT AGCCGTGTCG ACGAGCTTGA GCTTCAGTTG GCTCAGACCA AAAAGACGCT GGAGGAAACC ATGGCTACGC AGCATGAGAT AATGGCTTAT ATCGACAAGA AGAAAAAGAA GAAGAAGTTC TTCGGATTCT GAAAGACTTG ATAATGCATG CCTCAAGACT TTGAAGAAAC CTGGAAATAT ATAATTATTA TACATAAACA TAAATATATT CGTGAAGAGT TTTTAAAGAT AAAAATGTGG AAATTTGCTT TCTGTAAATT TTTTGTTATT TGTCCCTGGA AATATCCGAA AGCTTATGTC TACCACTTAT CATTCTTTCA CACCTAATTT GTAACGTACT AAAAACAAAA ATATATATGT TATAA 
Length2055
Protein Sequence
Protein Residue
Map Locationscaffold_4: 341033.. 345185
Download Sequence
A.thaliana
AGI-codeAT2G21540.1
DescriptionSEC14-like 3
TAIR curator summary
Alias[ATSFH3][SFH3][SEC14-LIKE 3][SEC14-like 3]
Gene coexpression
MR
MR Locus Description
23.9165 Ahg896275
37.3363 Ahg475800
42.4028 Ahg921700 ENTH/VHS/GAT family protein
46.1736 Ahg894086
50.3786 Ahg351608 Protein of Unknown Function (DUF239)
59.2453 Ahg338229
64.4981 Ahg904884 RNA-binding protein
78.6638 Ahg925744
80.2496 Ahg949205 transposable element gene
85.5745 Ahg486687 Dof-type zinc finger DNA-binding family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression