Detail



ID : Ahg486687

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486687|fgenesh2_kg.5__2679__AT3G61850.1
Sequence
ATTATATTTT ATTTTGCAGG TTTCTTCTCT TCTTCTTCTT CTTCCTCTTG GCTGCTTTCT TTCATCATCC ATAAAGTGAA AGCTAACGCA TAGAGAGCTA TATCGTCCCC AAAAAAGCAA AAGTCCAAAA AAAAAAACTA TCTCCAAAAC ATTCTCTCTT TGCTCTTTAC TCTTTAGTTT CTCTCTCTCT CTCTGCCTTT CTCTTTGTTG AAGTTCATGG ATGCTACGAA GTGGACTCAG GGGTTTCAAG AAATGATAAA CGTAAAACCA ATGGAGCAAA TGATTTCTAG CACTAACAAT AATACATCGC AACAACAACC AACATTCATC GCCACCAACG CAAGGCCAAG CGCCACCGCA TCCAATGGTG GCTCCGGCGG AAATAACAAC AACACGGCTA CCACGATGGA AACTAGAAAG GCGAGGCCAC TAGAGAAAGT AAACTGTCCA AGATGCAACT CAACAAACAC AAAGTTCTGT TATTACAACA ACTACAGTCT CACGCAACCA AGATACTTCT GCAAAGGTTG TCGAAGGTAT TGGACCGAAG GTGGCTCTCT TCGAAACGTC CCTGTCGGAG GTAGCTCAAG AAAGAACAAG AGATCCTCTA CACCTTTAGC TTCACCTTCT AATCCCAAGC TTCCAGATCT AAACCCACCG ATTCTTTTCT CAAGCCAAAT CCCTAATAAG TCAAAAGATC TCAACTTGTT GTCTTTCCCG GTCATGCAAG ATCATCATCA TCATGCTCTT GAGCTTCTAA GATCCAATGG AGTCTCTTCA AGAGGCATGA ACACGTTCTT GCCTGGTCAA ATGATGGATT CAAACTCAGT CCTTTACTCA TCTTTAGGGT TTCCAGCAAT GCCTGATTAC AAACAGAGTA ATAATAACCT TTCATTCTCC GTTGATCATC ATCAAGGGAT TGGACATAAC ACCATCAACA GTAACCAAAG AGCTCAAGAT AACAATGATG ACATGAACGG AGCAAGTAGG GTTTTGTTCC CTTTTTCAGA CATGAAAGAG CTTTCAAGCA CAACCCAAGA GAAGAGTCAT GGTAATAATA CATACTGGAG TGGGATGTTC AGTAATACAG GAGGATCTTC GTGGTGAAAA AGGTTAAAAA GAGCTCATGA ACTTATTATC TTTCTTCTCT TTTTCTCTTT TTTCTCCTAT TTTAGTAGAG TTTTTACTTT GATGATCTTT TGTTTTTTCT CACATGGGGA ACTTTACTTA AAGTTGTCAG AACTTAGTTT ACAGATTGTC TTTTTATTCC TTCTTTCTGG TTTTTTTTTT TCCTTTTTAA TCAGTCTTTT CAAAATATAT ATTTCATAAT TGGGTTTCAT GGTCATTCAT ATTTATTAGT ATCAAATAGA GTCTATGTTC ATGAGGAGTG TTAAGGGGTG TGAGGGTAGA AGAATAAGTG AATACGAGGG CTTCGTGTGT AATCAGTGAG ATCTGTATTC ATCATTTCTT CTATTTTAGA GGTATTTCTG TAATTTATTC AT 
Length1502
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19401237.. 19403494
Download Sequence
A.thaliana
AGI-codeAT3G61850.4
DescriptionDof-type zinc finger DNA-binding family protein
TAIR curator summaryZinc finger transcription factor of the Dof family involved in the control of seed germination.
Alias[DAG1][dof affecting germination 1]
Gene coexpression
MR
MR Locus Description
34.2929 Ahg323420 ataxia-telangiectasia mutated
40.5463 Ahg494985 Protein of unknown function (DUF789)
56.6745 Ahg351933
65.2687 Ahg481737 Plant protein of unknown function (DUF868)
81.9756 Ahg476492 Auxin efflux carrier family protein
84.6995 Ahg899363 Rhodanese/Cell cycle control phosphatase superfamily protein
85.5745 Ahg481021 SEC14-like 3
93.723 Ahg497160 Protein kinase superfamily protein
94.101 Ahg326001 galacturonosyltransferase 14
97.5295 Ahg482157 Protein of unknown function (DUF1218)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression