Detail


ID : Ahg481872

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481872|fgenesh2_kg.4__932__AT2G29570.1
Sequence
ACAATTGCAA TCTCCTCTCA GAAATTTCAA GAACCCTAAA AAACCCTAAC CGTTCAATTC ACACTCTAAG CTTTCGATAA TTTCCCAGAA GATGTTGGAG CTTCGTTTAG TTCAAGGTTC TCTACTAAAG AAGGTTCTAG AAGCGGTCAA AGATCTTGTG AACGATGCGA ACTTCGACTG TTCAAGCACA GGGTTCTCGC TTCAAGCTAT GGATTCGAGT CACGTCGCGT TGGTGTCTCT TTTGCTTAGA TCTGAAGGTT TTGAGCATTA TAGGTGCGAT AGGAATCTTT CCATGGGGAT GAATCTTGGT AACATGTCTA AGATGCTGAA ATGTGCTGGA AATGATGATA TCATCACTAT CAAGGCTGAT GATGGTAGCG ACACTGTGAC GTTCATGTTT GAGAGTCCCA CGCAAGACAA GATTGCTGAC TTTGAGATGA AGCTGATGGA TATTGACAGT GAGCATTTAG GAATACCTGA TGCTGAGTAC CACTCAATTG TGAGAATGCC TTCTGGTGAA TTTTCCAGGA TATGCAAAGA TCTCAGTAGT ATTGGTGATA CAGTTGTGAT CTCTGTGACC AAAGAAGGGG TCAAGTTTTC AACAGCAGGT GATATCGGGA CAGCAAACAT TGTACTCAGG CAGAATACTA CTGTCGACAA ACCTGAAGAT GCTATTGTGA TAGAGATGAA CGAGCCTGTT TCGCTTTCAT TTGCATTGAG GTACATGAAC TCCTTCACAA AGGCTACTCC ATTGTCGGAA ACTGTGACGA TCAGTTTGTC CTCTGAGTTA CCGGTTGTGG TGGAGTACAA GGTTGCTGAG ATGGGTTACA TTCGATACTA TCTGGCGCCT AAGATTGAAG AAGAAGAAGA CACTAAGCCC TAATAATGAT GAATGTTTTT TAGTTTTCGT TTAAGTCCTT TTGTTGAAAT GTCTGTCTTG ATTCAGTTGT TTTCTGGATT TACTATGTTA AGGCAACGGT AAACTAGATA ATCAAATGTC AGTTTGTCTT ATTGCAATTT GAAAAAGCTT GTTATAACTC TATTCATCTG TTTGTTAGAA GATTGAAGAA AAAGAAGACA CAAAGCCCTA AAACACGTTT GTTTGTGGCT TCTGCAACCT C
Length1121
Protein Sequence
Protein Residue
Map Locationscaffold_4: 12956579.. 12959199
Download Sequence
A.thaliana
AGI-codeAT2G29570.1
Descriptionproliferating cell nuclear antigen 2
TAIR curator summaryFunctionally interacts with POLH to repair DNA damaged by UVB damage.
Alias[ATPCNA2][PCNA2][A. THALIANA PROLIFERATING CELL NUCLEAR ANTIGEN 2][proliferating cell nuclear antigen 2]
Gene coexpression
MR
MR Locus Description
24.3105 Ahg472662 MLP-like protein 423
27.8209 Ahg496451 tubulin beta chain 2
28.0891 Ahg480563 plasma membrane intrinsic protein 2;8
29.189 Ahg489947 HMG (high mobility group) box protein
36.606 Ahg481792 Pathogenesis-related thaumatin superfamily protein
38.3667 Ahg496254 Replication factor-A protein 1-related
50 Ahg945946 SKU5 similar 4
57.2364 Ahg948636 minichromosome maintenance (MCM2/3/5) family protein
59.2368 Ahg481044 ribonucleotide reductase 1
60.7947 Ahg930445 topoisomerase II
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression