Detail



ID : Ahg482331

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482331|fgenesh2_kg.4__1391__AT2G33790.1
Sequence
AAAAACAAAA GAATAAAGAT GGGAATCATT GGTAAGTGTG TTTCTCTAAC TCTCTTAGCA CTTTTATGCT TCACTTCCTC TGTTTTCACC TTAGGAGTGA ATCAACCTGG TTCATCAGAT CCCTTCCATA GCCATCCCCA TCACCTTCCC ATACCTCCCA TCAAACTACC AAAACTCCCA CCGGCCAAAG CTCCCATCAA ACTACCAGTC TACCCACCAG CCAAAGCTCC GATCAAACTA CCAACTCTCC CACCAGCCAA AGCTCCGATT AAGTTACCAA CTCTCCCACC GATCAAACCT CCAGTTCTCC CACCAGTTTA CCCTCCTAAG TACAACAAGA CCCTAGTGGC CGTTCGAGGT GTGGTCTACT GCAAAGCCTG CAAGTATGCG GGCGTCAACA ACATCAAACC CGTTAAAGAT GCGGTGGTGA GACTTGTGTG CAAGAACAAC AAGAACCCAG TATCGGAGAC AAAGACGGAC ACGAAGGGAT ACTTCATGCT CTTGGCCCCT AAGACGGTGA CCAACTACGA TATCAAAAAT TGCCGAGCTT TCCTCGTGAA GTCGCCGGAC GCCAAATGCA GCAAAGTGTC AACGTTCAAT GGTGGATACA AGGGCTCCGT TCTAAAGCCG GTCTTGAAAC CAGGATTTTC CTCAGTCATC ATCAAAAAGT TCAAGTACGG TGTTTACAAC GTTGGTCCAT TCGCATTCGA ACCTACCTGC CCCAAATGAG ATGGTATGTA TCAGCTTGGG TTCTTTGTAA GGGCTTTTGT GTTAGTGTCT TTCAAATTTG CTTCTTAAAT AAAAAACGGT GACGTTTACA TATCAGGTTT TTCTTTTTTA ATCCTTATAT ATCTTCCTGA ATCCTGACCC CAAAAAAAAA AGAGTTTGAA TATGTTTTGT GGATGTTAAT GAACAGAACC GTTGATATTT TAGCCTAT 
Length938
Protein Sequence
Protein Residue
Map Locationscaffold_4: 15201919.. 15203233
Download Sequence
A.thaliana
AGI-codeAT2G33790.1
Descriptionarabinogalactan protein 30
TAIR curator summarypollen Ole e 1 allergen protein containing 14.6% proline residues, similar to arabinogalactan protein (Daucus carota) GI:11322245, SP:Q03211 Pistil-specific extensin-like protein precursor (PELP) {Nicotiana tabacum}; contains Pfam profile PF01190: Pollen proteins Ole e I family
Alias[AGP30][ATAGP30][arabinogalactan protein 30]
Gene coexpression
MR
MR Locus Description
20.025 Ahg947612
29.8831 Ahg893437
32.249 Ahg471495 C2H2 and C2HC zinc fingers superfamily protein
36.0555 Ahg900119
40.0999 Ahg344288
41.7612 Ahg921128
43.8862 Ahg358371 Pectin lyase-like superfamily protein
61.9355 Ahg919507 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
64.622 Ahg492774 Transducin/WD40 repeat-like superfamily protein
64.6916 Ahg342636 AP2/B3-like transcriptional factor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression