| Annotation |
|---|
| Description | jgi|Araly1|483672|fgenesh2_kg.4__2732__AT2G45350.1 |
| Sequence |
ATGGAGTGTT CGATTTCATC CACCATTCAA GTCCTTGGAA GCTGCAAAAC TTCATATGAC GTGAACAAAA TCCACGCGGG ATTGATTAAG ACGGGAATTA TCAAAAATTC TAATCTCACT ACAAGGATTG TTCTCGCTTT TGCCGCTTCT CGACGACCGT ATCTCGCTGA ATTCGCGCGT TGTGTCTTCC ACGAGTATCA CGTATGTTCA TTTTCACCCG GAGAGATGGA GGATCCATTT TTATGGAACG CCGTGATCAA GTCTCACTCT CATGGAAAGG ATCCGAGACA AGCTCTGCTC TTGTTCTGTT TGATGCTCGA GAATGGTGTT TCCGTGGACA AATTCTCACT GTCCCTTGTT CTTAAAGCGT GTTCGAGGTT AGGTTTTGTA AAAGGAGGAA TGCAGATTCA TGGGTTTTTG AGAAAGACTG GACTTTGGTC GGATTTGTTT CTACAGAATT GTTTGATTGG GTTGTATCTG AAATGTGGTT GTTTAGGTTT TGCCCGCCAG ATATTTGATA GAATGCCGCA GAGAGACTCT GTTTCTTACA ATTCCATGAT TGACGGGTAT GTCAAATGCG GATTGATTGA ATCCGCGCGT GAATTGTTCG ATTTGATGTC AAGAGAGATG AAGAATTTGA TATCTTGGAA CTCTATGATA AGTGGATATG CTCAGACATC AGATGGAGTT AACATAGCTT CAAAACTGTT TGCTGAAATG CCTGAGAAGG ACTTGATTTC ATGGAACTCA ATGATCGATG GATATGTAAA ACACGGAAGA ATCGAGGATG CTAAGGGTTT ATTTGATGTG ATGCCGAGAA GAGATGTGGT TACTTGTGCT ACCATGATTG ATGGGTATGC AAAGTTAGGT TTTGTTCATC AGGCTAAGAC TCTGTTTGAC CAAATGCCTC TTAGAGATGT TGTGGCATAT AATTCTATGA TGGCTGGTTA TGTTCAAAAC AAGTGTCACA TGGAAGCTCT TGAAATATTT AACGACATGG AAAAGGAGAG TCACTTGTCA CCCGATGAAA CGACTTTGGT AATCATTCTT TCTGCAATTG CTCAGCTTGG CCGATTATCG AAAGCCACCG ATATGCATTT GTATATTGTG GAGAAACAAT TCTATCTAGG TGGAAAACTC GGCGTTGCTC TCATTGATAT GTATTCGAAA TGCGGAAGCA TACAACACGC CATGTTGGTT TTCGAGGGAA TCGAAAACAA AAGCATTGAT CACTGGAATG CTATGATTGG TGGGCTAGCT GTTCATGGTC TTGGAGAATC CGCATTCAAT ATGCTCTTGC AGATCGAGAG ACTCTCCATA ATACCAGATG ATATCACCTT TGTTGGAGTT TTAAATGCTT GTAGCCACTC TGGATTAGTG AAGGAAGGCC TTCTCTGCTT TGAGCTCATG AGGAGAAAAC ACAAGATAGA ACCAAGGTTG CAACACTATG GGTGTATGGT CGACATACTA TCGAGATCCG GTAGTATAGA GCTAGCCAAA AACTTAATAG AGGAAATGCC AATTGAGCCA AATGATGTCA TATGGAGAAC ATTTCTCACC GCTTGTAGTC ACCACAAGGA GTTTGAAACG GGAGAGCTTG TCGCGAAACA CCTTATTTTG CAGGCTGGCT ATAACCCGAG CTCATATGTG CTTCTCTCTA ACATGTATGC TAGTTTTGGA ATGTGGAAGG ATGTTCGTAG AGTTAGAACG ATGATGAAGG AAAGAAAGAT AGAGAAAATT CCTGGATGTA GTTGGATTGA GCTCGATGGA AGAGTCCATG AGTTCTTTGT AGATAGCATT GAAGTTTCCA ATACATTGTA G |
| Length | 1821 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 20945220.. 20951753 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G45350.1 |
| Description | Pentatricopeptide repeat (PPR) superfamily protein |
| TAIR curator summary | Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-E subfamily) with 11 pentatricopeptide (PPR) repeats. The protein is involved in RNA editing of the initiation codon of ndhD in the chloroplast. |
| Alias | [CRR4][CHLORORESPIRATORY REDUCTION 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.84886 |
Ahg485692 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 19.4679 |
Ahg335256 | ATP binding microtubule motor family protein |
| 41.2795 |
Ahg943476 | translocon at the outer envelope membrane of chloroplasts 159 |
| 52.915 |
Ahg478408 | SAD1/UNC-84 domain protein 2 |
| 57.463 |
Ahg479727 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 60.2495 |
Ahg343537 | SNF2 domain-containing protein / helicase domain-containing protein |
| 60.2744 |
Ahg326886 | DEAD box RNA helicase (RH3) |
| 65.4523 |
Ahg489651 | |
| 66.468 |
Ahg949712 | 1-amino-cyclopropane-1-carboxylate synthase 12 |
| 67.3053 |
Ahg353700 | DNA topoisomerase, type IA, core |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|