Detail



ID : Ahg484653

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484653|fgenesh2_kg.5__645__AT3G28830.1
Sequence
ATCCAAAAAG GAGAAAAACA AAAAAAAAAA CAAAACAAAA CCAAAACCAA AAAAAAAAAA AAATGGCAAG AATTTCACTA GGGATATGTC TGATGTTAGT AGTAGCATCA AGTGTGATCT ATGAAGCGCA AGGAACGTTC TTATTAAAAC TTTACTTGAA GAAGAATTTT CCAAGAAAAT GTAACGAGTT TACGCCTTTC GCCAACAAGG GTATGATGAC GTTGGTGACT GATCTAGAAG GTAGCTCTCC CGCGACTGCA GAGTTCAAGA CATTCTTTAC ACAGTTCAAG TCTTACATGT CCTTCATCGA GACGACATCT GCCTCAACAA AAAATGTTGA TGCCGAGATG ACAACCAAAT GTGACGCACT TTTCAAGGCC ATGTCTGCAT TGAGTGCTGG TAAAGGCGAA AAATCAGCGG AGGCTGGGGG TATGAAGGCG ACCCTGTTGT CTATGGGAAA GACTTTGGTT GAGCAGAAGA AGAATACAAA GATAATGACA TTGAAGCAAA AGAAAGAGTT GGTCATATCT ATGGTGAAAT GGACTAAAAT GGTTGCTACA TTCGTAAAGT CGGCCTCCGA GAAGAAAGGA AAGTCAATCA ATATAGCATC TTATGGTCTT GATGTCGATG TTAATGACAG TTCTATTGTT GGTGGAGCTG CAAGTAGTGA ATCCTCAACT AAATCTGGAG CAGTTTCCAC TAGCGGAAGT GTTTCTACCA AGACAAAAGA ATCGAGTAGT GGAAGTTCTT CCAGCGGAAG TGTTGATACC AAATCAAAAG AATCAAGCGG TGGAAGTGTT GCTGCCAAAT CAAAAGAATC AAGCGGTGGA AGTGCTGCTG GAGCAAATTT CAAAGACACT ACAGGTAAAA ATTCGGGCAG TCCGAGCGGA AGTCCCAAGG CCAGCCCATC TGGTTCAGTT GGTGGCAAAT CCTCTTCAAA AGAAAGTGCG AGTGCTCAAG GAGGCGCAAG TTCTCAAGGA AGCGCTAGTG CTCAAGGAAT TGTAAATGGG GCAAGAGCTT TCTCCAAGAA CAAAGAAACA AAGACATCGA GCCAAAGACA ATCAAAATCA TCGAGCGAAA GTTCATCTAG TAGCACAACC ACCACAACAG TGAAACAAGT CGAGAGTGAG ACTTCCAAAG AAGTAATGTC ATTCATAACT CAACTCGAGA AGAAGTATGC AGCAAAGTCG GAACTCAAGG TCTTCTTCGA GTCTCTGAAG TCTTCCATGC AAGCTTCCGC AAGCGTTGGT TCCAAAACCG CGAAAGACTA TGTTTCTGCC TCAAAAGCAG CCACTGGTAA ACTCTCTGAA GCCATGGCTA CAGTTAGCTC AAAAAATGTC AAATCAGCAA AGATGAAGAG CAACTTGGAC ACCAGCAAAG ATGAATTGAT GAAGTGTGTC AAACAAATTC AAGATATCAA CAGTAAACTG GTGAGTGGCA AGACCGTGTC ATCAACACAA CAGTCAGAGC TCAAGCAGAC AATCACCAAG TGGGAAAAAG TCACCACCCA ATTTGTTGAG ACCGCTGCTT CTTCGAGTTC ATCGTCATCC TCATCCTCAT CCTCATCTTC TGCTGCTTCT CAGCAGCAGG GCAATGCAGG AATGGTCAAG ACTAATTGAG TTCAAAGGCG AAGTTGCTTT ATCGCCAAAG ATCACCAAGA AAGACAAAAC CAGTAATGCC AAAATATTAT AATAAGTAGC TAATTAACTA TTAGATCATT TATTTTTCAT GTAAATAAAA CTAAGATCGG TTATAGGTAA GCAAGCAATG CATGCCTATA AACCGATGTA TGCAAGTAAT AACTCTGTAA AAAAAACGAT ACAGATAGAT TGTAACCGCT TTGTATGTTA ACATACAAAA GTGAGTGATA CCTATTAAAG GGATTTTTGA ATA 
Length1893
Protein Sequence
Protein Residue
Map Locationscaffold_5: 4635833.. 4637889
Download Sequence
A.thaliana
AGI-codeAT3G28830.1
DescriptionProtein of unknown function (DUF1216)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.87298 Ahg471616 Pectate lyase family protein
8.94427 Ahg895134
17.4356 Ahg491351 Plant protein of unknown function (DUF827)
25.0998 Ahg922484 LOB domain-containing protein 32
28 Ahg486219 arabinogalactan protein 23
32.0312 Ahg918933 polygalacturonase 4
36.2353 Ahg950614 AGAMOUS-like 82
39.3827 Ahg472434
43.2666 Ahg948729 Galactose oxidase/kelch repeat superfamily protein
44.2493 Ahg486726 VANGUARD 1 homolog 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression