| Annotation |
|---|
| Description | jgi|Araly1|925100|scaffold_200661.1 |
| Sequence |
GAACTAAAAC TACACACACC ATGGGTTCCG TGAAGAGAAA ATCAGTGGAG GTATCTTCTG ATTCTGCTCC GCCGCAAAAG GTTCAGAGAG AAGACGATTC CTCCCAAATC ATCAACGAAG AGCTTGTGGG TTGCGTTCAC GATGTTTCCT TCCCTGAAAA TTACGTTCCT CTTGCTCCCT CCGTCCACGC GAAACCACCG GCTAAAAATT TCCCCTTTAC ACTTGACTCC TTCCAATCTG AAGCTATCAA GTGTCTCGAT AATGGCGAAT CAGTCATGGT TTCAGCTCAT ACATCAGCTG GTAAAACTGT TGTGGCGTCC TATGCTATTG CCATGTCTTT GAAGGAAAAC CAGAGGGTTA TTTATACTTC TCCTATAAAG GCACTTAGTA ATCAGAAGTA CAGAGATTTT AAAGAAGAGT TTTCTGATGT TGGTTTGATG ACTGGGGATG TCACTATTGA TCCTAATGCC TCTTGCCTTG TCATGACCAC GGAGATCTTG CGTAGTATGC AGTATAAAGG GTCAGAGATT ATGCGGGAGG TTGCCTGGAT TATTTTTGAT GAGGTGCATT ACATGCGAGA TAGCGAAAGA GGTGTGGTTT GGGAAGAGAG TATTGTCATG GCTCCGAAGA ATTCTCGTTT TGTGTTTCTA TCTGCAACTG TTCCCAATGC CAAGGAGTTT GCTGATTGGG TTGCAAAGGT TCACCAACAA CCATGCCACA TTGTTTACAC CGATTATCGG CCGACTCCGC TTCAGCATTA TGTCTTTCCT GCTGGAGGTA ATGGACTTTA CTTGGTTGTG GATGAAAAGG CTAAATTTCA CGAGGATAGC TTCCAGAAAT CTCTTAACGC ACTAGTTCCG ACTAATGAGG GTGACAAGAA AAGAGATAAT GGAAAGTCTC AAAAGGGATT AGTGATGGGA AAACTTGGTG AAGAAAGTGA TATTTTCAAA TTGGTGAAAA TGATAATTCA GCGACAATAT GATCCCGTAA TTTTGTTTAG TTTCAGCAAA AAGGAATGCG AGGCACTTGC TATGCAGATG TCTAAGATGG ATTTAAACAG CGATGATGAG AAAGACGCTG TGGAGACAAT CTTTACTAGT GCAATTGATA TGCTTTCAGA TGATGATAAG AAGCTACCTC AGGTGTCAAA TATTTTACCC ATCTTGAAAC GTGGTATAGG CGTTCATCAT TCAGGACTGC TTCCAATTTT GAAAGAAGTA ATTGAGATAT TATTTCAGGA AGGTCTTATT AAGTGTTTGT TTGCAACAGA GACATTTAGT ATTGGATTGA ACATGCCGGC AAAGACGGTT GTGTTTACCA ATGTACGTAA GTTTGATGGA GACAAGTTCC GGTGGCTATC AAGTGGAGAG TACATACAGA TGAGTGGTCG TGCTGGACGT CGAGGTATTG ACAAACGAGG TATCTGCATC CTCATGGTTG ACGAGAAAAT GGAACCCGCT GTTGCTAAAT CAATGCTCAA AGGAAGTGCT GATTCTTTGA ACAGTGCCTT CCATTTAAGC TATAACATGC TTCTAAATCA GTTGCGGTGT GAAGAAGGTG ATCCTGAGAA TCTTCTGCGC AATTCGTTCT TTCAGTTTCA AGCTGACCGT GCTATACCTG ATCTCGAGAA TCAAATAAAA TCCCTGGAAG AAGAGAGAGA CTCTATGGTG ATTGAAGAAG AAGAAAGCTT AAAAAATTAC TATAACCTGA TTTTGCAATA TAAGAGTCTG AAGAAGGATA TACGTAAAAT TGTGTTCACT CCAAAGTACT GCTTACCCTT TTTGCTGCCA AACAGAGCTG TTTGTCTCGA TTGCACAAAT GATGATGAAG AGCCACAATC ATTTAGCATT GAAGACCAGG ATACATGGGG AGTGATAATG AAATTTAACA AAGTCAAAAG CTTATCTGAA GATGATGATA ATAGAAGACC GGAGGATGCA AACTACTCTG TAGATGTATT GACTAGATGT ATGGTTAGCA AAGATGGTGT TGGCAAAAAG AAAGTTAAGG CTGTGCCAAT TAAGGAACGT GGTGAGCCTG TTGTGGTCAC TGTTCTTTTG TCTCAGATTA AGAGTTTAAG CAGTGCAATC ATGAATATAC CAAAAGATCT TGTACCACTG GAAGCTCGAG AGAATGCTCT GAAGAAGGTT TCTGAGTTAC TCGCTAGACA TCCTGATGGA ATACCCCTAG ATCCTGAAGT TGATATGAAG ATTAAGAGCA GCTCTTACAA AAAGACAGTT CGTCGGCTGG AGGCTCTGGA AAATCTTTTT GAAAAACACA AAATTGCGAA ATCTCCCCTC ATAACAGAAA AGCTGAAAGT TCTACACATG AAGGAAGAGC TAACAGCCAA GATCAAGTCA CTTAAAAAAA CTGTCCGATC ATCAACAGCA TTGGCGTTTA AAGATGAACT CAAAGCCAGA AAGCGTGTTT TACGAAGACT AGGATACATC ACTAGTGATA ATGTCGTGGA GTTGAAGGGT AAGGTTGCAT GTGAAATCAG TAGTGCAGAA GAATTGACAT TAACGGAGTT AATGTTCAGT GGTATCTTCA AGGATGCAAA GGTGGAGGAG TTGGTTTCGC TTCTCTCTTG CTTTGTGTGG CGAGAGAGAG TCCCTGATGC CGCTAAACCT AGAGAAGAAC TCGACTTGCT ATTCATACAG TTACAGGACA CAGCCAGGCG TGTTGCTGAA CTTCAGCTTG ACTGCAAGGT CGAAATCGAT GTGGAGAGTT TTGTTCAATC GTTCAGACCA GATATAATGG AGGCGGTGCA TGCTTGGGCA AAAGGGTCGA AATTCTATGA GGTCATGGAG ATTGCTCGTG TTTTCGAAGG GAGCTTGATC AGAGCGATAA GGAGAATGGA GGAAGTTCTG CAACAGCTCA TAGTAGCTGC AAAATCTATA GGAGAAACAC AGCTTGAAGC TAAACTAGAA GAAGCTGTTT CCAAGATCAA AAGAGACATT GTATTTGCAG CGTCTCTCTA CTTGTGATGT CGTGTGCTTA TCTCATC |
| Length | 3007 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 3374380.. 3378955 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G59760.1 |
| Description | RNA helicase, ATP-dependent, SK12/DOB1 protein |
| TAIR curator summary | |
| Alias | [AtMTR4][MTR4][homolog of yeast MTR4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.74456 |
Ahg477585 | DegP protease 7 |
| 8.94427 |
Ahg898458 | Cleavage and polyadenylation specificity factor (CPSF) A subunit protein |
| 11.225 |
Ahg478089 | Transcription factor jumonji (jmjC) domain-containing protein |
| 13.4164 |
Ahg950166 | co-factor for nitrate, reductase and xanthine dehydrogenase 5 |
| 14.2829 |
Ahg950867 | U5 small nuclear ribonucleoprotein helicase |
| 18.4391 |
Ahg471082 | Pseudouridine synthase family protein |
| 20.567 |
Ahg325654 | transducin family protein / WD-40 repeat family protein |
| 23.0651 |
Ahg483365 | |
| 24.3721 |
Ahg496022 | uncoupling protein 2 |
| 24.454 |
Ahg485823 | TRICHOME BIREFRINGENCE-LIKE 36 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|