| Annotation |
|---|
| Description | jgi|Araly1|487684|fgenesh2_kg.6__818__AT5G08450.2 |
| Sequence |
AGAGAGGCAA AAGTCCGAAT CCAGTTTGGC ATTTATACTT CCCGGCGGCA AAAAATCCAA AAGGGTTTGC TTCTTCGTGC TCTGCTTCAG TTTCAATTGG TTGTGTAATA ATCAAGTGCA ATTCTATCTG TTGCATCAGT GGATTTTTGG GTTTGTGAAT TTTGGAGTGA TGAGTGGTGT TCCAAAGAGA TCTCACGAAG AGGGTGTTAC TCATCCATCT TCTTCTTCTT CAGCACCAAA ATACCCTCAC GAGGATTCTG GATCTTACCC TAAATCGCCG CATCAGCCTG TTACGCCACC ACCGGCTCAG GTTCATCATC ACCATCAACA ACAACCCCAT CAGCATCCCC AATCTCAATC TCAACCTCAA CCTCAACCTC AACCTCACCT CCACACGCTT CCTCATCCCC ACTCTCATTC ACCACTTGCT GCTGCTTCTG CTTCTGCTGC TTATGAGGTT GAATCTAGAA CGGTGGTTAA GGTTGCGAGA AGTGAGCCTA GAGATGGAGA GAGACGCTCT CCTCTCCCTC TTGTCTATCG GTCTCCGTCC CTGCCCACTA CTGTTTCTTC TAGTGATCCT CATTTGACTC ACGCCCCTGT GCCCATGGAA CCGAGAGAAG GTACTAAGGA TGGCAGGGAA ATTAGGGTTG AGAACAGAGA AAGTAGGAGT GATGGAAGGG AGATTTATGG TGAGACAAAG AGAGAGATTC AGGGTCCTAA GAGTGACAGA GATGTGAAGT TTGATAGATC AGTAGACGAT TTTACCGGAA AAGGTAATAC CGGAAGCTAT TCTAGGAATG ATGGGAGAGA GATGTATGGT GAGACTAAGA GGGAGATTCA GGGTCCTAAG AGTGACAGGG ATGCCAAGTT TGAGCGTCCA GGGGATGATT TTAGCGGAAA AAGTAATACC GGTAGCTATA CGAGGGATAC GAAATTTGAT AGGGAGAATC AGAATTATAA TGAACAAAAG GCGGAGATTA AGATGGAAAA GGACGGGCAT GCTCACTTGG CTTGGAAAGA GCAGAAGGAT TACCCTAGAG GCAAGAGAGT TGCTGAAGGT TCGACTGCAA ATGTGGATCC GTGGGTTGTA TCCCGCGGTA ATCCGCAAGG CCCAACTGAG GTTGAGCCTA AGGATTTCTC CGCGCCTGTG GAGGGGCCCC ATTTAGAAGG ACGTGAAACT GTCGGAGAAA ACAAGGTTGA TGCAAAAAAT GAAGATAGAT TTAAGGACAA AGATAAGAAA AGAAAAGAGT TAAAGCATCG AGAATGGGGG GACCGAGATA AGGATAGAAA TGACCGTCGA GGATCCGTGC TTATTGGTAG TGTCATGAGT GAACCCAAAG AGATTGGAAG AGACGAAAGA GAATCCGATA GGTGGGAACG GGAGAGGATG GAGCAGAAAG ATCGAGAAAG GAATAAAGAG AAAGATAAAG ATCATATCAA AAGAGAGCCA AGGACTGGTG CTGAGAAAGA GATCTCACAG AACGAGAAAG AGTTGGGAGA AGCATCTGCC AAACCATCAG AGCAGGAATA TGTGGCACCA GAGCAGAAGA AGCAGAACGA ACCGGATAAT TGGGAAAAAG ACGAAAGAGA ATCAAAGGAA AAAAGGAGAG AGAGGGATGG TGATTCAGAG GCAGAAAGAG CTGAAAAGCG CAGCAGAATC AGTGAAAAAG AATCTGAAGA TGGGTGTTTG GAGGGTGAAG GAGCTACTGA GAGGGAAAAG GATGCCTTCA ATTATGGAGT TCAGCAGCGG AAGAGAGCGC TGAGACCGAG AGGCAGCCCA CAAACCACAA ACCGCGACCA TGTCCACTCA CGGAGTCAGG ACAACGAAGG AGTACAAGGC AAGTCAGAGG TGTCGATTGT TGTTTACAAA GTTGGCGAAT GTATGCAAGA ACTGATTAAA TTGTGGAAAG AATATGATTT GTCTCATCCT GATAAAAGCG GTGATTTTGC AAATAATGGC CCCACTCTTG AAGTTAGGAT TCCAGCTGAG CATGTTACTG CTACAAATCG CCAAGTAAGA GGTGGCCAGC TATGGGGAAC AGATATATAC ACAGACGATT CCGATCTTGT TGCTGTTCTC ATGCATACAG GTTACTGTCG TCCCACAGCT TCTCCTCCTC CACCGACAAT GCAAGAGCTG CGCACTACTA TTAGAGTCTT GCCGTCACAA GATTACTACA CCTCCAAGCT AAGGAATAAT GTCCGTTCTC GAGCATGGGG AGCTGGAATC GGATGCAGTT ACAGAGTTGA GCGGTGCTAT ATACTGAAGA AAGGAGGTGG GACTATTGAA CTGGAACCTT CTCTTACACA CTCCTCAACT GTGGAGCCAA CACTTGCACC AATGGCTGTT GAAAGATCTA TGACCACCAG AGCTGCAGCT TCGAATGCTC TGCGGCAACA AAGGTTTGTA CGAGAAGTCA CAATACAATA CAATCTCTGC AATGAACCTT GGATCAAATA TAGCATAAGC ATTGTTGCTG ATAAAGGTCT CAAGAAGCCT CTTTTCACCT CTGCCCGCTT GAAGAAAGGA GAAGTTTTGT ACTTAGAAAC TCATTCATGC AGGTATGAGC TCTGTTTCGC TGGAGAGAAA ACCATCAAAG CAATCCAAGC GTCTCAACAA CAATCATCAC ATGAAGCTAT GGAGACAGAT AATAATAATA ACAAGTCACA GAACCATCTG ACAAACGGTG ACAAAACAGA TTCAGACAAC AGTTTAATCG ATGTTTTCCG TTGGTCACGC TGTAAGAAAC CTCTCCCGCA GAAGCTTATG CGGTCTATCG GGATTCCACT CCCAGCAGAT CATATCGAGG TGTTGGAGGA GAATCTTGAT TGGGAAGATG TACAGTGGTC ACAAACTGGT GTTTGGATTG CTGGAAAAGA GTACACACTT GCTCGTGTTC ATTTTCTCTC GCCCAACTAA AAAAAACCTT TCATGCATTG CTTTTTTCTT ACAAAACTTT TTATATTTTA TTTATGATTA GAGACTACAG TTACTTTGTC TTGTCTTGTC TTGTGTTCTT CTTCCTTGTA ACATTTATT |
| Length | 3039 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 3191933.. 3193834 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G08450.1 |
| Description | |
| TAIR curator summary | |
| Alias | [HDC1][RXT3-like][Histone Deactylation Complex 1][RXT3-like] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.4641 |
Ahg910790 | Transducin/WD40 repeat-like superfamily protein |
| 4.24264 |
Ahg890636 | |
| 21.8403 |
Ahg478973 | ubiquitin-conjugating enzyme 25 |
| 23.9165 |
Ahg475057 | Chaperone DnaJ-domain superfamily protein |
| 29.3939 |
Ahg487312 | Surfeit locus protein 6 |
| 36.2215 |
Ahg479149 | TOPLESS-related 2 |
| 38.0657 |
Ahg491691 | signal recognition particle receptor alpha subunit family protein |
| 41.1825 |
Ahg480822 | heavy metal atpase 4 |
| 41.7732 |
Ahg359494 | nuclear factor Y, subunit A6 |
| 45.3652 |
Ahg477808 | nucleotide repair protein, putative |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|