Detail



ID : Ahg488227

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488227|fgenesh2_kg.6__1361__AT5G13990.1
Sequence
AATCGCTTCT CTAACCACAA ATCCTAAAAG TCTAAACGAA AACAGAACAC ATGAATCTCT CCTTCCTCTG CATCTCAATT CCACTTCGCC ATTTTTAAAG CTTTTTACGT AAATAATAAG AAACGATGGA GAAGAACAAC GACAAGGATC CTGATCATGA TGACAAATCC AAGGAAGATG AGAAGAAAGG CGACGTCGTT TCTGATGCTC ATCTCTCAGA TGATGTGCAT CAGGATGGTA GCAATAATAA AGAGAATGTA GATGTTGTTG GTAATGCGGA GACAGATCAT CAAGATCCAG GGGATGACAA TGTCGACAAG GTTTCACAAG GAGAAGAAGC ACCCGAGATT CGTCAAACCT TGGAGTCTTT GTCTGAAGAA CTCGATCAGT TTCTCCCGAC TCTTTCCCTT CACATGGAGG AGCACAAAGA TTGCACCGAG GAGAAAGGAG AGGATGGTTA TTTTCAGATC CCACAGTTTG TTGGGAAATT CTTGGATCTT TTTGAGGAAA AACTCTCCAA ATATGACTCT GGTGAGCCTA AGACGGTGTG GTATCAAGAT CCCGAAGAGG TGTCTTCGCT TTTAGAGGCA GTGGACCGTG TCTCAAAGCT TATGGTGCTA TTGCTCAACA CCAAGTCTTG TTTGGACCAT CATGAGTCCT TGATCAACCA TGCGGGATCC ATCCAGCAGC GCGCAATGGC TTTCTTGGAA GACGAATTCC GCATCATTTT AGAAGAATCT GTGACCAAAG AGTCTGTGGT TGTCACCGAT GACAGCAACA GCCAGAGGAG GAGCACTGCC GATCAGCAAG ACCACCAGAA TGATGTGGTG GTCTCACAAG ATCAAGACCA GATGCTCGTT CCCGAATGCG GTGATCAGGA GATCGAATAT CCCGGTTACC CGGAGGATGT GGTTGTGGTG CTGAGGAAAA TAGCGGAGAA GATGAAAGCA GGAGGGTATG GATGGGAATG TAGAGAGGTT TATTTGGTGG GGAGGAGGAA TATCTTGATG CGCACTTTAA AACAAGATTG TGAGTTTGAG AAAGTTAGCA TCGACGAAGT GCAGAAAATG AGCTGGGACA CGCTTGAGAG AGAGATCCCT ATTTGGAACA AGACTTTCAA GGACTGCTCT TCTCTCTTCT TCCCTGGTGA GCTAAAACTC GCAGAGAGGA TATTCCCAGG GGACGAGGGG AGCTTATTCT GTATTGTCAC ACACGGTCTG GCCATCCAGT TCTTGGGTTT CGCAGAGGCC GTGGCCATGA CAAGGCGCTC CACTGAAAAG CTCTTCAAGA TCCTCGACAT CTATGAGACT CTGCGGGACA GTTTTCCGGC CATGGAGGAG CTGTTTCCGG AGGAGCTCCG GGGCGAGCTG AGGAACGAGG TGACCAGTGC TCGTTCCCGA CTTGGAGAGA CTGCGATTCA CATTTTCTGT GATCTGGAGC ACTCCATCAA ATCAGATTCA AGCAAGACCC CGGTGCCAGG AGGGGCGGTG CATCCGTTGA CGAGGTACAC CATGAACTAC CTCAAGTACT CGTGCGAATA CAAAGACACG CTGGAACAAG TGTTCAAGAG TCACTCGAAG TTGGAGCGAG AGGAGGAGGA ACCTGTGGAG AGCGGAAACT CGGCCTTCGC AAGCCAGCTG ATGAGGATAA TGGAGCTACT TGACGGGAAC CTGGAGACAA AGTCAAAACA GTACAAAGAC ATACCACTGA GCTGCATCTT CATGATGAAC AACGGGAGAT ACATAGTGCA GAAGATCAAA GGATCAGCAG AGATACACGA GGTGATGGGT GACACATGGT GCAGGAGGAG GTCGTCAGAG CTTAGGAACT ATCACAAAAA CTACCAGAGG GAGACGTGGG GGAAGCTGCT GGGTTTCTTA GGGCACGAGG GACTCATGCA TAATGGCAAG ATAGTAAAGC CCAATCTCAA GGAGAGGTTC AAGAGCTTCA ACGCAACATT TGACGAGATA CACAAGACAC AGACCACGTG GGTAGTCAAC GACGAGCAGC TGCAGAGTGA ACTAAGGGTC TCCATAACTG CAGTCATGAT ACCTGCCTAC AGGGCCTTCA TGGCCAGGTT TGGACAGTAC TTGGATCCTG GTCGCCAGAC CGAGAAGTAT GTCAAGTATC AGCCTGAAGA TATCGAGGAT CTCATCGACC AGCTCTTTGA AGGCAACACC TCCTCCTCTT CCACTGCCAC CGCCAGGCGA AGAACATAGC TTCTTTCTTT TCTTCTTTTT TCTTTTGCTA TAACACTTTT TCCTGATTTC CTCAATTTTT TTCATGTCTT CTTCAACTGT TTTTGTCTGA AATGCCACAA CTTGGATGAC CC 
Length2332
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5449626.. 5451948
Download Sequence
A.thaliana
AGI-codeAT5G13990.1
Descriptionexocyst subunit exo70 family protein C2
TAIR curator summaryA member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
Alias[ATEXO70C2][EXO70C2][exocyst subunit exo70 family protein C2]
Gene coexpression
MR
MR Locus Description
26.9629 Ahg936571
33.0454 Ahg359005
56.2317 Ahg932829
59.2621 Ahg478975 expansin 12
75.1133 Ahg470979 NPK1-related protein kinase 1
82.7164 Ahg904078 glutaredoxin-related
86.4292 Ahg942510 transposable element gene
93.4666 Ahg485138 ABC2 homolog 5
97.6064 Ahg481945 LOB domain-containing protein 13
98.2548 Ahg338146 KNOX/ELK homeobox transcription factor
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression