| Annotation |
|---|
| Description | jgi|Araly1|488757|fgenesh2_kg.6__1891__AT5G18700.1 |
| Sequence |
ATGAATCAGT ACCACATATA CGAAGCTATT GGACATGGCA AATGCTCGAC TGTGTATAAA GGAAGGAAGA AGAAGACGAT CGAGTATTTT GCCTGCAAGA GTGTGGACAA GTCGCGGAAG AGCAAGGTTC TTCAAGAGGT CAGGATCCTT CACTCGCTAA ATCATCCAAA CGTACTCAAG TTCTATGCGT GGTATGAAAC TTCTGCTCAC ATGTGGTTAG TTCTGGAATA TTGCGTTGGA GGTGATCTCA GGACATTATT GCAGCAGGAC TGTAAACTGC CAGAAGAATC AATCTATGGT TTTGCTTTTG ATCTTGTTAT AGCTCTGCAG TACTTACATT CAAAAGGAAT TATATATTGT GATCTGAAAC CATCAAACAT CTTACTTGAT GAAAACGGGC ATATTAAGCT GTGTGATTTT GGATTGTCAA GGAAGCTGGA TGATATTTCT AAATCTCCTT CCACGGGAAA ACGTGGTACC CCGTATTATA TGGCTCCAGA GCTATATGAA GATGGAGGGA TCCATTCTTT TGCTTCTGAT CTGTGGGCAC TTGGTTGTGT ATTATATGAA TGTTACACAG GAAGACCTCC TTTTGTGGCA AGAGAATTTA CCCAGCTTGT GAAATCTATT CATTCAGATC CAACTCCTCC ACTCCCTGGA AATGCAAGCC GTTCATTTGT CAATCTCATT GAGTCTCTTC TTATCAAAGA CCCAGCTCAA AGAATACAAT GGGCAGATCT CTGTGGTCAT GCATTCTGGA AGAGTAAGAT AAACTTAGTA CAGCTGCCTA CTCAGCCTGC TTTTGATAAT ATGATTGGCA TATACACAAA GCCATGCCTT TCCGAGCGAA ATGGAGACAG ACCAAATAAG ACCCCTCCAA AGTATCGGGA GAAAGATCCA AAAGGGGGTT CAAAGCAAAA TGAGAACTCC GTTCAAGGTT CAAAAGGCCA TGAGACGCCG ATAAAGGGTA CGCCTGGTGG TTCTAAAGCT CAAACAAAGC TTCCTAGTAG AGCAACTGAG GAAAAGCATG GAGGTCGTCC TGGTGCTAAC AGACAGATGA ATATTCTGAG ATTGTCAAGG ATAGCAAAGG CAAATCTTCA AAAGGAAAAT GAGAAGGAAA ACTATAGGAG ACCCTTACCT AATAGCAACG AGAATTGTGC AGAAGTGAAG ATTGAGAACA CTGACATGGA ACTTGATTTT GATGAAAACA ATGATGATGA GGGACCTGAT GAATCAGAAG GAACCGAAAA CACCTCTTGT GCACAAGAAG AAAGAGTTGT GAGCCAAAAT GAGAGTCACA GAAGACAAGG AGTTCTAAGC AGTAATGTGC CTGATGAGAA CTCATCTGCA AATGAAACAC CAATCTCGGG TGAAGCAAAA GATTGCCATG AAGAGCAGTC AGAGCAAATG GACGTGTCAG CTGCGCCACC TAGTGCTAGT CCTCAACTTA AAACTCACCG AGGAAGAGAA ATTTCTGGGG TTGCTGTTAA TCATGACTCA TCTAAAACAC CTACTAGCCT CAGTGACGTC CTTTGGCATA TATCTGATCT TTCTGTTAGG CCTGTCATGC CCAGCAGAAA ATCTGACAAA GAAGCTGTGC CTTCTCTCTT ATTCGAAACA CCACAGCCTT CTGATTTTGG TAAGATGGGA AAGCAAGAAT TAGAACCGCT TAACAATAGG ATCATAACAG TTCTAAGTGG GAGCAGTTCT GGCCTGTCAG AGAAACAGAA TTTGATCAGA TACCTCGAGA CATTGAGTAG CAATGCTGAT GCAGCCAACA TCCTGACCAA CGGACCAATA ATGCTTGTGC TTGTTAAAGT TCTGAGATTA TCCAAGACCC CAGCATTTCG TGTACAAATT GCTTCACTAA TTGGTTTGTT AATTCGGCAT TCTACTTCAA TCGAAGATGA CTTGGCAAAT TCTGGTATTT TAGACTCTCT TACTAATGGC CTCAGAGACA AGCATGAAAA AGTGAGAAGA TTCTCTATGG CAGCTCTAGG TGAATTGCTA TTCTACATCT CAACTCAAAA TGAGCATAAG GATTTCAAAC CACCAGAATC CCCATCAAAA GAAACCCGGT CTGCATCGGG TTGGCAGGTT TCGAATGCCT TGATCTCTCT TGTATCATCT GTCTTACGGA AGGGAGAAGA TGACCTGACT CAGCTCTATG CGTTAAGGAC GATAGAAAAC ATCTGCAGTC AAGGAGCTTA CTGGGCCACC CGTTTCTCCA GCCAAGATTT GATTAGCAAC CTCTGCTATA TCTACAGGGC AACTGGGAAA CAGGAGAGCA TGAGGCAGAC GGCTGGATCA TGTTTAGTCC GTCTTGCTCG CTTTAATCCT CCTTGCATTC AGACGGTCGT GGAAAAGCTT TCATTGAAAG AAATAGCTTC GTCATTTGTC AAAGGCAGCG CACGAGAGCA GCAAGTCTGC TTAAATCTTC TGAACATGGC TATGATTGGA AGTCATACAT TCACAAGCTT TGGAAGGCAT CTTGTGACAT TGACAGAGGA GAAAAATCTT TTCCCTAGTT TGCTCTCCAT CATAGAGCAA GGAACGGAAG TTCTGAGGGG GAAAGCTCTT CTCTTTGTTG CACTTCTCTG CAAAAACAGT AGGCGTTGGC TGACAAATTT CTTCTGCAAT GCAAGATTTC TTCCTGTGGT GGACAGATTA GCTAAAGAAA AAGACAGTTA CGTGCAACAA TGTCTTGAGG CATTTGTGAA TGTAATCGCC TCCATAATAC CGGGCTTGCT GGATACAATA ACCAATGATA TCCAACAACT GATGACAGGA AGACGCCATG GACCTGTCTC TCCCCTTAAC AGTCGAGCTC CTTTAAAGAC TAATGCACAC CTGTTCCCTG TGGTTCTTCA TCTTCTCGGA AGCTCTTCGT TTAAGAACAA GATGGTAACT CCACAAGTCG TAAGGCAGTT GGCAAATCTT ACAAAACTTG TGGAAGCATC ATTTCAGGGA AGAGATGACT TCCGTATAAC CCTTCTTCAA GTTCTAGAAT GCATAGCAGG AGATGCGCCT CTGGTTACAC AAAATGGTGA GATTATTATC CGTGAGATTC TCCCATCTCT GGCTGTAATT TACAATGGAA ACAAAGACGG GGATGCTCGG TTTCTCTGTT TGAAGATCTG GTTCGATTCA ATGACCATTC TCTTAACTGA GTGCACTGAA ATCGAGCAAC AAACATCTGA GGATTTGAAA TCAATATCCA ACTCTCATTT TCTCCCACTC TACCCTGCAC TGATCCAAGA CGAAGATCCA ATCCCAGCTT ACGCTCAAAA GCTCCTTGTC ATGCTTGTTG AGTTTGATTA CATCAAAATC TCCAACTTAT TGCATCATAA TACAGTTTCA CAATGCTTCG AGTTTCTTCT CGGAGACTTA TCAAGCGCAA ATGTGAACAA TGTCAAACTC TGTCTTGCCT TAGCTTCAGC TCCAGAGATG GAAACTAAAC TACTCTCTCA GCTCAAAGTA GTGAGGAGAA TCGGAAATCT GTTGGAATTC GTGAATGCCA AAGACATGGA AGATTTCCTC GAACCCACTT TAAGTCTCTG CAGAGCTTTT CTGCTACGGT CACTTGGGAA CAAGAAAGGT CTCAGCTCCA ACTACACAAA AGAGCCAACG CTTTTATCAG AGACATCTTT TACATTCGAG GTTGATCCAC AGGAATGCAT AAGAGACATT GCAGATTTCG GTAGCAACAT TGGCCTGTTC TTGCACTTTG CAGGTTTAGA TGACGACACA AGCATCGCAG TCGCAGATAT TGCCTCTGAA TGTGTTGTAT TGCTACTCAA AGCGGCTTCG AGAGAAGCCA CGACGGGATT CTTAACCAAT CTTCCTAAGA TCACACCGAT TCTGGACTCG TGGCGCAGGA GGAAGAGCAC AGAGCTACAC TTGTTGGTTC TGAAGAGAGT CTTACATTGT TTGGGTTATG CTTGCAAGCA GTATCTATCG CAGGCGATGA TTTTGTCGAT ATCAGGACAC GATGTCTCGA AGATCAACAC CATCGTCTCT GAGATGAAGA ACTCAGACGT CGCTGGTCTT AATAGCGTTG CCACCCTCGT TGCTATGGAA TTGCAGAGAT TGCCTCGTTG AGTTTGAAGT TTTCTGAACA AAGCAGGATT AACAACAATG ACGCTGAGCT GTAGATTTGG AGTACGTACG AGGTAAAACA AACGCAAAAA CATGTGACAA ATTGAAACCC AGAATCGAGA TTTGTCTCTT TTTAATGTAT ATTTCTTCTC TCCATTACAA ATTTTGTACC ACTAGTACAA TCTACTTCCT TAATATTATC TTCATTTAGA C |
| Length | 4311 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 7442988.. 7448682 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G18700.1 |
| Description | Protein kinase family protein with ARM repeat domain |
| TAIR curator summary | Encodes a microtubule-associated kinase-like protein RUNKEL (RUK). Contains a putative serine/threonine kinase domain and a microtubule-binding domain. RUK directly binds to microtubules in vitro and colocalizes with mitotic preprophase band, spindle, and phragmoplast in vivo. Required for cell plate expansion in cytokinesis. |
| Alias | [EMB3013][RUK][EMBRYO DEFECTIVE 3013][RUNKEL] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.7082 |
Ahg494222 | Pectin lyase-like superfamily protein |
| 15.4272 |
Ahg477561 | |
| 20.9523 |
Ahg494697 | WPP domain protein 1 |
| 21.3542 |
Ahg471298 | cytochrome P450, family 77, subfamily B, polypeptide 1 |
| 25.219 |
Ahg474153 | Protein kinase family protein with ARM repeat domain |
| 25.6125 |
Ahg477690 | Li-tolerant lipase 1 |
| 26.3249 |
Ahg491360 | Transducin family protein / WD-40 repeat family protein |
| 31.8434 |
Ahg473038 | arabinogalactan protein 31 |
| 33.2265 |
Ahg489947 | HMG (high mobility group) box protein |
| 34.5832 |
Ahg917240 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|