Detail



ID : Ahg488773

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488773|fgenesh2_kg.6__1907__AT5G18870.1
Sequence
CCACAAAGGT TTGTTCTAGT CGTCACCATT ATTGGACTCT TAGGTCATGA CCTCACATGT GTTCTGTCTA GCCCACACCG TATTCTATTG GACACAGATG TCGACACAGA CGACTTCATC GCTCTGTTGT ACCTCTTGAA GCTCAATAAA ACAGAATTCG ATCTAGTCGG GATTACATTA AGTGCCAACG CTTGGACAAA CGCAGGACAT GGAGTGAATC ATATATACGA CATTCTTTAC ATGATGGGTC GTGACGATAT CCCCGTTGGT ATTGGAGGTG AAGGTGGGAT TCTCGATGAT GGTACTATTC TTCCTGACGT CGGTGGTTAT CTTCCGATCA TCGAGCAGGG GATGACAACA GCAGGAGGAT GCAGATACAG ACAATCCATT CCAAAAGGTC TTGACTCCAA TTATGGATTT CGTAAACATT TTCTTCCTCT GGGGAACAGA AGATACACTC CTCTCGAGCA ACCAACGGCA CAAAAAGTAA TCTTCGACAA AGTTTCTCAA GGTCCAATAA GCATCTTCGT GATCGGTTCT CACACCAATC TCGCTCTCTT CATGATGTCA ACTCCTTACC TCAAACATAA CATCCAACAC ATTTACGTTA TGGGTGGTAG TGTACGCTGT CCAAACCCCA CCGGATTCTG TGGGAACTTG TTCACAGATT TCACAAGTAA TCCTTACGCT GAATTCAACA TCTTCACTGA TCCTTTCGCT GCTTACCAGG TGTTCCGATT ACTATGGTTC CTTTAG 
Length756
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7529418.. 7536550
Download Sequence
A.thaliana
AGI-codeAT5G18870.1
DescriptionInosine-uridine preferring nucleoside hydrolase family protein
TAIR curator summary
Alias[NSH5][nucleoside hydrolase 5]
Gene coexpression
MR
MR Locus Description
2 Ahg900951 Plant invertase/pectin methylesterase inhibitor superfamily protein
4.47214 Ahg346045 TRAF-like family protein
7.4162 Ahg922672
9.79796 Ahg900122 RING/U-box protein with C6HC-type zinc finger
11.3137 Ahg347894 cyclic nucleotide-gated channel 16
12.9615 Ahg493905 FBD / Leucine Rich Repeat domains containing protein
20.3961 Ahg333145 reversibly glycosylated polypeptide 4
20.8806 Ahg325141 DHHC-type zinc finger family protein
21.0238 Ahg496581 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain
23.4947 Ahg944404 armadillo repeat only 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression